{"id":"W3152829238","doi":"10.1016/j.neo.2021.03.008","title":"SalvGlandDx – a comprehensive salivary gland neoplasm specific next generation sequencing panel to facilitate diagnosis and identify therapeutic targets","year":2021,"lang":"en","type":"article","venue":"Neoplasia","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Stiftung Max und Sophielène Iten-Kohaut; Universitätsspital Zürich; F. Hoffmann-La Roche; Roche","keywords":"Mucoepidermoid carcinoma; Salivary gland; Adenoid cystic carcinoma; Adenocarcinoma; Pathology; Fusion gene; Biology; Cancer research; Carcinoma; Cancer; Medicine; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009683413,0.0003592369,0.000561583,0.0001447832,0.0002074158,0.0001727848,0.00006579233,0.0001222292,0.0003732776],"category_scores_gemma":[0.00005505795,0.0003070035,0.0001367831,0.0003022424,0.00005045304,0.000163792,0.00008088079,0.0001971199,0.0002309978],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001793738,"about_ca_system_score_gemma":0.0001457011,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002047507,"about_ca_topic_score_gemma":0.0002390694,"domain_scores_codex":[0.9979591,0.00013167,0.0003974653,0.0007119591,0.0003690878,0.0004307284],"domain_scores_gemma":[0.998558,0.0002997577,0.00007669064,0.0004359599,0.0002547551,0.00037486],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003078614,0.0007267329,0.8956047,0.0002733133,0.0008072716,0.005267499,0.00641741,0.0001348335,0.04016144,0.0003341862,0.02007096,0.02989384],"study_design_scores_gemma":[0.004457519,0.0006694559,0.915068,0.0002974304,0.0003803438,0.001945738,0.001380086,0.0003898228,0.03052137,0.0002333384,0.04410788,0.0005490094],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9834665,0.01218081,0.0001560033,0.002196654,0.0005074682,0.0006510981,0.00007491685,0.00009434028,0.0006722355],"genre_scores_gemma":[0.9900748,0.00425038,0.00144349,0.002801774,0.0003634882,0.0002087786,0.0004207593,0.00004587888,0.0003906849],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02934483,"threshold_uncertainty_score":0.9999382,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2225907170172925,"score_gpt":0.3071624231030762,"score_spread":0.08457170608578377,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}