{"id":"W3152938727","doi":"10.1128/mra.00098-21","title":"Complete Genome Sequences of 10 Lactococcal <i>Skunavirus</i> Phages Isolated from Cheddar Cheese Whey Samples in Canada","year":2021,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Canada","keywords":"ORFS; Siphoviridae; Lactococcus lactis; Genome; Biology; Virulence; Lactococcus; Whole genome sequencing; GC-content; Bacteriophage; Genetics; Microbiology; Open reading frame; Bacteria; Gene; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001728799,0.0006404821,0.0004580035,0.001880569,0.001089334,0.0007912661,0.0005308143,0.0002787962,0.002756241],"category_scores_gemma":[0.0004391916,0.0002641414,0.0006098836,0.002715417,0.0003647898,0.0001958401,0.0004087168,0.0005770769,0.001035165],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004969252,"about_ca_system_score_gemma":0.0123856,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7468683,"about_ca_topic_score_gemma":0.8141607,"domain_scores_codex":[0.9996879,0.000008711805,0.0000169836,0.00005006776,0.0001393179,0.00009701223],"domain_scores_gemma":[0.9994367,0.00004013746,0.00007685604,0.00002089525,0.0002849411,0.000140442],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001449217,0.000148071,0.05446685,0.001019561,0.0001656928,0.0008359522,0.00237072,0.00132877,0.8764085,0.0007435403,0.006800921,0.05426223],"study_design_scores_gemma":[0.00007422626,0.0002667996,0.8115162,0.0002006639,0.0002571168,0.0007002183,0.002274493,0.00116918,0.06919515,0.0002366653,0.1140109,0.00009848811],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8000126,0.003500179,0.003592018,0.0002915299,0.00005442671,0.0002348866,0.1837832,0.0003155182,0.008215599],"genre_scores_gemma":[0.513705,0.004119296,0.01258403,0.000258671,0.00002645799,0.0001636792,0.4564898,0.000174362,0.01247886],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2531317,"threshold_uncertainty_score":0.5092448,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01607065057907799,"score_gpt":0.2195671515718214,"score_spread":0.2034965009927434,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}