{"id":"W3153770661","doi":"10.1128/msystems.00258-21","title":"Free-Living, Psychrotrophic Bacteria of the Genus <i>Psychrobacter</i> Are Descendants of Pathobionts","year":2021,"lang":"en","type":"article","venue":"mSystems","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Nunavut Wildlife Management Board; Natural Sciences and Engineering Research Council of Canada; Government of Canada; Max-Planck-Gesellschaft; Nunavut General Monitoring Plan","keywords":"Biology; Ecotype; Actinobacteria; Clade; Phylogenetics; Zoology; Gammaproteobacteria; Microbiology; Evolutionary biology; Bacteria; Genetics; 16S ribosomal RNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002140246,0.0001075603,0.0002627386,0.00001225268,0.0001116057,0.000004877296,0.0006020918,0.0001172869,0.002569488],"category_scores_gemma":[0.0000691389,0.00008286547,0.0001024958,0.0002014957,0.0002488565,0.00005562813,0.0005073728,0.0001501692,0.00005893678],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003989391,"about_ca_system_score_gemma":0.00002185528,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003639305,"about_ca_topic_score_gemma":0.002635501,"domain_scores_codex":[0.9986411,0.0005896762,0.0003054845,0.000178155,0.0001022954,0.0001832784],"domain_scores_gemma":[0.9986757,0.00007323885,0.0002995837,0.0008949762,0.00002104682,0.00003546713],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001444789,0.0001806921,0.1779808,0.00008161233,0.00002183893,0.000003081589,0.0003880101,0.00003787823,0.815284,0.00003727002,0.005777426,0.0001929473],"study_design_scores_gemma":[0.0003568531,0.00009284217,0.9476857,0.0003619289,0.00002133667,0.00005494079,0.0001324064,0.00001872023,0.03477482,0.000128661,0.0162174,0.0001543627],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968533,0.00009607305,0.00001163758,0.00008169202,0.0008212335,0.0001453723,0.00009785159,0.000008615677,0.001884225],"genre_scores_gemma":[0.9994032,0.00002668732,0.00007036407,0.000140558,0.00003489435,0.000005701494,0.000006058942,0.0000092102,0.0003032924],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7805092,"threshold_uncertainty_score":0.9983423,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01227224465992265,"score_gpt":0.2098508173540305,"score_spread":0.1975785726941078,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}