{"id":"W3154920950","doi":"10.3390/v13040694","title":"New World Cactaceae Plants Harbor Diverse Geminiviruses","year":2021,"lang":"en","type":"article","venue":"Viruses","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Arizona State University","keywords":"Biology; Genome; Phylogenetic tree; RefSeq; Virus classification; Plant virus; Genetics; Phylogenetics; Virology; Virus; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009372396,0.0001667067,0.0002123226,0.00002302055,0.0002731427,0.0001192994,0.0002722172,0.0000497633,0.003663308],"category_scores_gemma":[0.0002002751,0.00006531872,0.00007809004,0.0004212187,0.00005357971,0.0002312846,0.0002996571,0.0001429806,0.0008656952],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002691961,"about_ca_system_score_gemma":0.00004179699,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001275596,"about_ca_topic_score_gemma":0.01341214,"domain_scores_codex":[0.9986382,0.00007711098,0.0001586693,0.0003439377,0.000350368,0.0004317426],"domain_scores_gemma":[0.9990856,0.0005243433,0.00004919059,0.0000804543,0.00005179067,0.0002086389],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004402332,0.00005747149,0.01107988,0.000003925314,0.00004840536,0.0001295909,0.00003990298,9.45977e-7,0.7472291,0.0001204602,0.2176359,0.0236104],"study_design_scores_gemma":[0.0001270154,0.00003835158,0.0642837,0.00002964301,0.000008784198,0.000004840104,0.0001845573,0.000002320397,0.1994257,0.00009466885,0.7356059,0.0001944755],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9876565,0.002191123,0.000001881986,0.001245104,0.0002936303,0.0001386132,0.001349344,0.0001942834,0.006929475],"genre_scores_gemma":[0.9693497,0.003750661,0.0004642369,0.004755549,0.001881549,0.00002637605,0.0001279424,0.000004421101,0.01963952],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5478033,"threshold_uncertainty_score":0.9999123,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08947170035573457,"score_gpt":0.2907139131187276,"score_spread":0.201242212762993,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}