{"id":"W3155224867","doi":"10.1186/s12864-021-07568-4","title":"Long-term TE persistence even without beneficial insertion","year":2021,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Social Sciences and Humanities Research Council of Canada","keywords":"Persistence (discontinuity); Term (time); Transposable element; Biology; Genomics; DNA Transposable Elements; Computational biology; Data science; Genetics; Genealogy; Evolutionary biology; Genome; Computer science; History; Gene; Engineering; Physics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008370541,0.0002963643,0.0006037594,0.0002033932,0.001092445,0.001560217,0.001186785,0.001666074,0.007714408],"category_scores_gemma":[0.005471298,0.0002918129,0.0007119081,0.0003172894,0.001186448,0.003076323,0.001636026,0.002446539,0.001771213],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000917925,"about_ca_system_score_gemma":0.001100949,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00309632,"about_ca_topic_score_gemma":0.003510924,"domain_scores_codex":[0.9996691,0.00005434468,0.00001589951,0.0001132009,0.00006701981,0.00008054949],"domain_scores_gemma":[0.9985329,0.000684039,0.0001274466,0.0002673002,0.000180359,0.0002079704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008246748,0.000460213,0.03188075,0.001337425,0.0005165297,0.003063369,0.001928895,0.2936108,0.257584,0.2812054,0.04291273,0.08467528],"study_design_scores_gemma":[0.0003450506,0.001353921,0.01600124,0.000228063,0.0004082965,0.00276687,0.00237978,0.4142869,0.06662939,0.3708433,0.1243706,0.0003865334],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8386757,0.002450277,0.09292829,0.01887123,0.001472158,0.0000652673,0.00120226,0.001852442,0.04248238],"genre_scores_gemma":[0.9874094,0.0004610456,0.005817586,0.001496618,0.0000540345,0.00006216498,0.0004284592,0.0003021316,0.003968664],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007714408,"threshold_uncertainty_score":0.02580732,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04077500631457151,"score_gpt":0.2261112590527914,"score_spread":0.1853362527382199,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}