{"id":"W3155545361","doi":"10.1016/j.chom.2021.03.012","title":"Defined mouse microbiota: An “evolving” tool","year":2021,"lang":"en","type":"letter","venue":"Cell Host & Microbe","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Selection (genetic algorithm); Host (biology); Gut flora; Microbiology; In vivo; Computational biology; Evolutionary biology; Genetics; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0001897332,0.0008285875,0.0006950464,0.000137701,0.0002534036,0.0002468557,0.001047106,0.002390636,0.0005494426],"category_scores_gemma":[0.00005204047,0.0009002156,0.0004438787,0.0001635071,0.0001614204,0.00000960201,0.0007243973,0.001523014,0.0003638698],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001086081,"about_ca_system_score_gemma":0.0007622759,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001325431,"about_ca_topic_score_gemma":0.00009250886,"domain_scores_codex":[0.996256,0.0002293386,0.0006305353,0.001579822,0.000152904,0.001151418],"domain_scores_gemma":[0.9970767,0.00001966043,0.000324788,0.002069477,0.0003475241,0.0001618123],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000009806216,0.00007599033,0.00004246505,0.0002368479,0.00003708667,0.00007142017,0.00002653906,2.959856e-7,0.5040033,4.010933e-7,0.495466,0.00002978359],"study_design_scores_gemma":[0.0004686537,0.0001570597,0.00008991401,0.00004557281,0.00005875764,0.0001089934,0.00001861318,6.052792e-7,0.3862557,0.000001504366,0.6121244,0.0006702002],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"commentary","genre_scores_codex":[0.7826601,0.02780879,0.0003962951,0.172998,0.004044755,0.002308072,0.00353169,0.0002806073,0.005971697],"genre_scores_gemma":[0.005598565,0.002182417,0.006001035,0.8321626,0.007688478,0.00005117091,0.03885603,0.0005386946,0.1069211],"genre_candidate":"commentary","genre_consensus":null,"teacher_disagreement_score":0.7770615,"threshold_uncertainty_score":0.9993448,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009863924306144566,"score_gpt":0.2278433103250817,"score_spread":0.2179793860189371,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}