{"id":"W3155686554","doi":"10.1002/jmv.27026","title":"Comparison of saliva with oral and nasopharyngeal swabs for SARS‐CoV‐2 detection on various commercial and laboratory‐developed assays","year":2021,"lang":"en","type":"article","venue":"Journal of Medical Virology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre intégré universitaire de santé et de services sociaux de la Mauricie-et-du-Centre-du-Québec; Centre intégré de santé et de services sociaux de Chaudière-Appalaches; Centre Intégré de Santé et de Services Sociaux des Laurentides; Centre Hospitalier Universitaire de Sherbrooke; Hôpital Charles-Le Moyne; Université de Sherbrooke; Centre hospitalier universitaire de Québec; Institut National de Santé Publique du Québec; Institut universitaire de cardiologie et de pneumologie de Québec; Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Centre intégré universitaire de santé et de services sociaux de l'Est-de-l'Île-de-Montréal; Centre Intégré Universitaire de Santé et de Services Sociaux du Saguenay–Lac-Saint-Jean; Centre Hospitalier de l’Université de Montréal; Université Laval; Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Virology; Saliva; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Microbiology; Biology; Medicine; Outbreak; Infectious disease (medical specialty); Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008503144,0.0001235736,0.0006396897,0.0001395851,0.0000748505,0.00001070911,0.00005690433,0.0002609641,0.0000189612],"category_scores_gemma":[0.001755682,0.00009263269,0.00004741985,0.0001731767,0.0001979797,0.00004670061,0.00003330921,0.0006103017,7.618411e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003415483,"about_ca_system_score_gemma":0.0003362244,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002019869,"about_ca_topic_score_gemma":0.000216934,"domain_scores_codex":[0.9985146,0.0001679354,0.0005241516,0.0001555422,0.0004644115,0.0001733468],"domain_scores_gemma":[0.9985757,0.0005322364,0.0003411671,0.00008173125,0.0003349773,0.0001342208],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00722648,0.0009614162,0.08712712,0.0002990253,0.0005765628,0.0008993302,0.0008434139,0.000002808169,0.7630849,0.0002353219,0.001573182,0.1371704],"study_design_scores_gemma":[0.01880333,0.01312189,0.1783901,0.0003771819,0.0005337057,0.005658505,0.0003490564,0.002715833,0.7602884,0.0002022805,0.01932293,0.000236806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913722,0.0003446567,0.004464841,0.003289979,0.0003244742,0.00010695,0.000003460083,0.00001216847,0.00008128854],"genre_scores_gemma":[0.9937869,0.00003549734,0.0019148,0.003996413,0.0002432237,0.000002689338,0.000001524522,0.00001565025,0.000003355808],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1369336,"threshold_uncertainty_score":0.3777452,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06550792843407728,"score_gpt":0.3833826509598731,"score_spread":0.3178747225257958,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}