{"id":"W3156632136","doi":"10.1080/19490976.2021.1903825","title":"Association of Pre-diagnostic Antibody Responses to Escherichia coli and Bacteroides fragilis Toxin Proteins with Colorectal Cancer in a European Cohort","year":2021,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"Provincial Health Services Authority","funders":"Medical Research Council; Eusko Jaurlaritza; European Cooperation in Science and Technology; National Institute for Health and Care Research; Cancer Research UK; World Health Organization","keywords":"Bacteroides fragilis; Biology; Colorectal cancer; Escherichia coli; Microbiology; Toxin; Bacteroides; Antibody; Adenomatous polyposis coli; Cohort; Cancer; Immunology; Bacteria; Genetics; Internal medicine; Gene; Antibiotics; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009708891,0.0003659244,0.0004959159,0.0007070545,0.0004810957,0.0007744657,0.0004062978,0.0006646969,0.001663822],"category_scores_gemma":[0.001948293,0.000484305,0.0006897631,0.0008718432,0.0002997132,0.0003526749,0.000540608,0.0006418307,0.0002445558],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002155713,"about_ca_system_score_gemma":0.0002418419,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006353535,"about_ca_topic_score_gemma":0.004120844,"domain_scores_codex":[0.9993241,0.0001659918,0.00006182497,0.0002648294,0.00009175849,0.00009152051],"domain_scores_gemma":[0.9987765,0.0001931452,0.0003717457,0.0002694431,0.0001379888,0.0002511876],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002967682,0.00003274994,0.9981768,0.000007204191,0.000116044,0.0001052492,0.00005538845,0.00002652078,0.0005307762,0.00001522496,0.00005850097,0.0005788068],"study_design_scores_gemma":[0.000005383667,0.00006785934,0.9994418,0.00000248137,0.0000427919,0.0001925897,0.00004478509,0.00007176266,0.00003518388,0.000009981552,0.0000828695,0.000002351777],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990729,0.0002411944,0.0001286083,0.00002062389,0.000004814391,0.000006269863,0.0002461653,0.000004181093,0.0002752143],"genre_scores_gemma":[0.9992969,0.0001133291,0.00008032761,0.00002240612,0.000006253209,0.000006388497,0.0002764459,0.000002569802,0.0001953766],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006353535,"threshold_uncertainty_score":0.01263309,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004313909254965519,"score_gpt":0.2520475676751752,"score_spread":0.2477336584202097,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}