{"id":"W3157173773","doi":"10.1139/facets-2020-0101","title":"Detection of carbapenem-resistance genes in bacteria isolated from wastewater in Ontario","year":2021,"lang":"en","type":"article","venue":"FACETS","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada; Algonquin College; Carleton University; Canadian Food Inspection Agency","funders":"Government of Canada","keywords":"Carbapenem; Biology; Microbiology; Antibiotic resistance; Gene; Klebsiella pneumoniae; Drug resistance; Bacteria; Pseudomonas; Polymerase chain reaction; Antimicrobial; Antibiotics; Genetics; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001734009,0.0004346502,0.0003874922,0.001350771,0.002197783,0.001042925,0.0004226831,0.0003999168,0.001013561],"category_scores_gemma":[0.0008330231,0.000354448,0.0003611112,0.002459262,0.0007555528,0.0002182317,0.000658969,0.0002533887,0.0002429056],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.008262321,"about_ca_system_score_gemma":0.01193773,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9366083,"about_ca_topic_score_gemma":0.9677103,"domain_scores_codex":[0.9991913,0.00002564858,0.00004810976,0.0001384089,0.0003911081,0.0002053095],"domain_scores_gemma":[0.9992755,0.00005794199,0.0001463564,0.00002161631,0.0003909667,0.0001075909],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005202161,0.0001023566,0.6284782,0.0005803894,0.00006955888,0.002447682,0.01073706,0.0007470298,0.3292839,0.0001770326,0.001000467,0.02585606],"study_design_scores_gemma":[0.00001073972,0.0001531883,0.9776886,0.00004199159,0.00003961271,0.0004291839,0.004957009,0.0004764948,0.01053471,0.00002996524,0.005610129,0.0000284498],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995252,0.0002628218,0.0003520572,0.0001005671,0.000005937705,0.00006901663,0.001561705,0.00002335726,0.002372609],"genre_scores_gemma":[0.9907227,0.0007834775,0.00146131,0.0001146386,0.000004846653,0.0000403595,0.00256949,0.00001844387,0.004284965],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06339175,"threshold_uncertainty_score":0.1275301,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008110058233534568,"score_gpt":0.2125946198606539,"score_spread":0.2044845616271193,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}