{"id":"W3157173773","doi":"10.1139/facets-2020-0101","title":"Detection of carbapenem-resistance genes in bacteria isolated from wastewater in Ontario","year":2021,"lang":"en","type":"article","venue":"FACETS","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada; Algonquin College; Carleton University; Canadian Food Inspection Agency","funders":"Government of Canada","keywords":"Carbapenem; Biology; Microbiology; Antibiotic resistance; Gene; Klebsiella pneumoniae; Drug resistance; Bacteria; Pseudomonas; Polymerase chain reaction; Antimicrobial; Antibiotics; Genetics; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005915862,0.00011752,0.0001880628,0.00003283672,0.00001255634,0.00001388526,0.0001029264,0.0001640029,0.0001247844],"category_scores_gemma":[0.0000229334,0.0001236379,0.00004186093,0.00008633788,0.00003054951,0.000005415765,0.0000664938,0.0000852084,0.000006299189],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000600586,"about_ca_system_score_gemma":0.0001158622,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.006869639,"about_ca_topic_score_gemma":0.5942607,"domain_scores_codex":[0.9990892,0.00006768115,0.0002772389,0.0003167717,0.00007058131,0.0001784734],"domain_scores_gemma":[0.9995453,0.000006818434,0.00007229184,0.0003032956,0.00004536402,0.00002688356],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001512409,0.00003621291,0.1163307,0.00001025409,0.00001455978,0.00001518572,0.0001053778,0.00001616351,0.8831716,0.000001100295,0.00001513884,0.0001325475],"study_design_scores_gemma":[0.00034078,0.00001972015,0.368772,0.00003781571,0.00000321813,0.000001025,0.00004445945,0.000006178416,0.6274093,0.00001924435,0.003258449,0.00008776262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987127,0.0005262871,0.00008295951,0.0000236886,0.0002603875,0.00008700629,0.00001793275,0.000003819694,0.0002851805],"genre_scores_gemma":[0.9975064,0.00006417261,0.000719567,0.00002093781,0.0000292138,0.000003881319,0.0001410483,0.00001395409,0.00150084],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5873911,"threshold_uncertainty_score":0.9997437,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008110058233534568,"score_gpt":0.2125946198606539,"score_spread":0.2044845616271193,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}