{"id":"W3157518724","doi":"10.1101/2021.05.04.442596","title":"Telomere-to-telomere genome assembly of <i>Phaeodactylum tricornutum</i>","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Suncor Energy (Canada); Western University","funders":"","keywords":"Phaeodactylum tricornutum; Telomere; Genome; Biology; Sequence assembly; Genetics; Computational biology; Chromosome; Gene; Diatom; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002834382,0.0003918693,0.0002744528,0.0005549137,0.0003692141,0.0004813301,0.0003529946,0.0003015593,0.001465558],"category_scores_gemma":[0.0006197625,0.0002548351,0.0005101094,0.0006542933,0.0001468594,0.0002903252,0.000378467,0.000409043,0.0006575759],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004179285,"about_ca_system_score_gemma":0.0003477046,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00572746,"about_ca_topic_score_gemma":0.007515819,"domain_scores_codex":[0.9998285,0.00001410128,0.00001332683,0.00009387368,0.00003169922,0.00001850657],"domain_scores_gemma":[0.9996586,0.0000794896,0.00006149818,0.00005778041,0.0001001928,0.00004248357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001539131,0.00001533986,0.005240385,0.0002940142,0.00004881691,0.0002473311,0.0001723405,0.003564619,0.9747814,0.0003892825,0.0007673451,0.01432524],"study_design_scores_gemma":[0.00003660958,0.000203726,0.08302442,0.0001144882,0.0001605306,0.0006037959,0.000307515,0.03652777,0.8461159,0.0006457122,0.03219783,0.00006164641],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8769876,0.001049285,0.09039518,0.0001420789,0.0001174216,0.00008536081,0.02546504,0.002274846,0.003483251],"genre_scores_gemma":[0.7547225,0.0006069085,0.1778211,0.0001293859,0.0000148565,0.0001009978,0.06167269,0.001315281,0.003616364],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00572746,"threshold_uncertainty_score":0.01138824,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01085127648999196,"score_gpt":0.2147069452746439,"score_spread":0.203855668784652,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}