{"id":"W3158308147","doi":"10.1186/s40168-021-01056-3","title":"Anna Karenina and the subgingival microbiome associated with periodontitis","year":2021,"lang":"en","type":"article","venue":"Microbiome","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta Hospital","funders":"National Institute of Dental and Craniofacial Research","keywords":"Microbiome; Biology; Periodontitis; Oral Microbiome; Metagenomics; Phenotype; Aggressive periodontitis; Chronic periodontitis; Disease; Biomarker; Virulence; Biofilm; Genetics; Microbiology; Immunology; Gene; Medicine; Pathology; Dentistry; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005366091,0.0003007099,0.0005067805,0.0001305931,0.0005761412,0.0004092643,0.0003639166,0.0002574738,0.001602371],"category_scores_gemma":[0.0001525197,0.0002105569,0.0001527052,0.0006936684,0.001377767,0.0001714074,0.0003456835,0.0004740009,0.0004206015],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007976073,"about_ca_system_score_gemma":0.000173898,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002547262,"about_ca_topic_score_gemma":0.001586613,"domain_scores_codex":[0.9977835,0.0004972781,0.0003189512,0.0005990514,0.0001309581,0.0006702585],"domain_scores_gemma":[0.9988075,0.0002043775,0.0001116802,0.0004862777,0.000282038,0.0001081227],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004064865,0.0001527078,0.03582983,0.00006066303,0.0004944424,0.001441614,0.0007518469,9.18508e-7,0.938537,0.0006233264,0.02089232,0.0008088682],"study_design_scores_gemma":[0.02536309,0.0004125308,0.4389827,0.0006448793,0.0003673047,0.01650568,0.001081886,0.00003823005,0.2405986,0.0003264444,0.2736592,0.002019491],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914781,0.00404528,0.00004328255,0.001602919,0.0004473715,0.0002765526,0.0005854323,0.0001005651,0.001420481],"genre_scores_gemma":[0.9742854,0.0001152625,0.0002199782,0.0004633265,0.00009165336,0.00002212096,0.0005195507,0.00004822766,0.02423443],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6979384,"threshold_uncertainty_score":0.9993103,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009853407808379582,"score_gpt":0.2368141781531439,"score_spread":0.2269607703447643,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}