{"id":"W3158522740","doi":"10.1371/journal.pone.0250861","title":"Pathway-based analysis of anthocyanin diversity in diploid potato","year":2021,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Global Affairs Canada; Universidad Nacional de Colombia; International Development Research Centre; Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)","keywords":"Anthocyanin; Biology; Genetics; Phenylpropanoid; Candidate gene; MYB; Single-nucleotide polymorphism; Gene; Transcription factor; Botany; Biosynthesis; Genotype","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000892704,0.00005422393,0.0002261894,0.00002106959,0.0000687298,0.000007492836,0.0001019198,0.00004109837,0.0002425307],"category_scores_gemma":[0.000034529,0.00002258195,0.00008653787,0.000971298,0.00002211109,0.00002407456,0.00007523205,0.00004589789,0.000003923785],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000118761,"about_ca_system_score_gemma":0.000008471243,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001154234,"about_ca_topic_score_gemma":0.004219924,"domain_scores_codex":[0.9993512,0.0000537342,0.0001154777,0.0001646877,0.0001956677,0.0001192297],"domain_scores_gemma":[0.9997207,0.0000921923,0.00004873781,0.00004285316,0.00005642329,0.00003910636],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001362194,0.0005791127,0.2005016,0.00000780635,0.00009706766,0.00003682565,0.00001317987,0.0000142558,0.7984905,0.00002807138,0.000002044414,0.0002159579],"study_design_scores_gemma":[0.00006991748,0.00002789509,0.8473279,0.00003317585,0.0001441932,1.061467e-7,0.00006294036,0.0002983224,0.1519105,0.00002103254,0.00003587374,0.00006812264],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987801,0.0001764048,0.000001571329,0.0002155238,0.000005593037,0.00003582408,0.000375563,0.00001177297,0.0003976948],"genre_scores_gemma":[0.9994001,0.00004884739,0.0002166852,0.00007091607,0.00001186704,0.000001305456,0.0001193974,2.108693e-7,0.0001306631],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6468264,"threshold_uncertainty_score":0.2655541,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05038167713670192,"score_gpt":0.1940901483872943,"score_spread":0.1437084712505924,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}