{"id":"W3158601594","doi":"10.3324/haematol.2020.271957","title":"MAPK and JAK-STAT pathways dysregulation in plasmablastic lymphoma","year":2021,"lang":"en","type":"article","venue":"Haematologica","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":81,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"European Regional Development Fund; National Cancer Institute; Agència de Gestió d'Ajuts Universitaris i de Recerca; National Institutes of Health; Ministerio de Economía y Competitividad; Generalitat de Catalunya","keywords":"Lymphoma; Biology; Cancer research; Neuroblastoma RAS viral oncogene homolog; Comparative genomic hybridization; Plasmablastic lymphoma; Fluorescence in situ hybridization; MAPK/ERK pathway; PAX5; Mutation; Signal transduction; Gene; Genetics; Immunology; Chromosome; KRAS; Transcription factor","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005050419,0.0001247426,0.0003309966,0.00005785511,0.00004667892,0.00002100657,0.00002299357,0.00009091347,0.0001449781],"category_scores_gemma":[0.0001126248,0.0000930658,0.00004315473,0.0001539143,0.00004478433,0.0000414651,0.000046155,0.00002962473,0.00006746202],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008550762,"about_ca_system_score_gemma":0.00007953434,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001808712,"about_ca_topic_score_gemma":0.00004990301,"domain_scores_codex":[0.9991568,0.00003945175,0.0002025217,0.0002799671,0.0001272589,0.000193955],"domain_scores_gemma":[0.9995121,0.0001389996,0.00004343978,0.0001759712,0.00003966223,0.00008984842],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003676208,0.002302694,0.8694459,0.0003787441,0.0001440532,0.02441029,0.0008237945,0.00002438661,0.002254083,0.03833807,0.001635636,0.05987479],"study_design_scores_gemma":[0.004034211,0.0001949365,0.9741209,0.0001954808,0.00006516317,0.002568964,0.0002152754,0.0006393975,0.01423971,0.001604683,0.001992119,0.000129218],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934134,0.001149449,0.00002254129,0.0008770446,0.0000637409,0.0001750017,0.000006515552,0.00004760903,0.00424467],"genre_scores_gemma":[0.9981246,0.0002337873,0.001043192,0.0003283007,0.00001557068,0.00004775695,0.00004412329,0.000008357507,0.0001543273],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.104675,"threshold_uncertainty_score":0.3795113,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02286479361307594,"score_gpt":0.2419730421974589,"score_spread":0.2191082485843829,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}