{"id":"W3158601594","doi":"10.3324/haematol.2020.271957","title":"MAPK and JAK-STAT pathways dysregulation in plasmablastic lymphoma","year":2021,"lang":"en","type":"article","venue":"Haematologica","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":81,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"European Regional Development Fund; National Cancer Institute; Agència de Gestió d'Ajuts Universitaris i de Recerca; National Institutes of Health; Ministerio de Economía y Competitividad; Generalitat de Catalunya","keywords":"Lymphoma; Biology; Cancer research; Neuroblastoma RAS viral oncogene homolog; Comparative genomic hybridization; Plasmablastic lymphoma; Fluorescence in situ hybridization; MAPK/ERK pathway; PAX5; Mutation; Signal transduction; Gene; Genetics; Immunology; Chromosome; KRAS; Transcription factor","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001152773,0.000281696,0.000163823,0.0006329495,0.0001688302,0.0002934836,0.0001255472,0.0002594628,0.001046507],"category_scores_gemma":[0.0001803813,0.0001309429,0.0001819439,0.0003607365,0.0001781381,0.0002263996,0.0001937925,0.000193222,0.0002686167],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002547488,"about_ca_system_score_gemma":0.0001956566,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003095227,"about_ca_topic_score_gemma":0.0004475409,"domain_scores_codex":[0.9998887,0.00001762056,0.000008704609,0.00002605073,0.00003610032,0.00002289508],"domain_scores_gemma":[0.9999484,0.000008633794,0.00002003787,0.000003639714,0.000008232793,0.00001112418],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001578285,0.000109696,0.2934408,0.0005058029,0.0001558257,0.008584945,0.0004055486,0.0009355846,0.6359355,0.0005653584,0.000636057,0.05714654],"study_design_scores_gemma":[0.00005956569,0.0003247086,0.9084989,0.00006375332,0.0002189836,0.0289045,0.0004738891,0.002977465,0.05139778,0.00129806,0.005760268,0.00002206713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9936813,0.004116757,0.0007554364,0.00007195323,0.000006354354,0.00001124469,0.000283483,0.00005525475,0.001018088],"genre_scores_gemma":[0.9983817,0.0008020833,0.0004026222,0.00002752011,0.000006016206,0.000009058196,0.0001376901,0.000003597923,0.0002295241],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001046507,"threshold_uncertainty_score":0.003500938,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02286479361307594,"score_gpt":0.2419730421974589,"score_spread":0.2191082485843829,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}