{"id":"W3158982234","doi":"10.1186/s12864-021-07775-z","title":"Transcriptomics unravels molecular players shaping dorsal lip hypertrophy in the vacuum cleaner cichlid, Gnathochromis permaxillaris","year":2021,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Karl-Franzens-Universität Graz; Austrian Science Fund","keywords":"Biology; Craniofacial; Muscle hypertrophy; Transcriptome; Phenotype; Transcription factor; Evolutionary biology; Gene; Gene regulatory network; Cell biology; Gene expression; Anatomy; Genetics; Endocrinology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002793301,0.0002154507,0.0001811299,0.00004747651,0.0001187345,0.00004376487,0.0002788101,0.0003019207,0.00003040828],"category_scores_gemma":[0.00003385013,0.0001916575,0.0001513583,0.0001522993,0.00007870277,0.000005502915,0.00009149485,0.0001601181,0.000020604],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005270772,"about_ca_system_score_gemma":0.0002569977,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001037859,"about_ca_topic_score_gemma":0.00009827187,"domain_scores_codex":[0.9986384,0.0001661791,0.0002911228,0.0004575203,0.0001174707,0.0003292989],"domain_scores_gemma":[0.99944,0.00001918052,0.00006362679,0.0003740609,0.00005600084,0.00004712397],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009073284,0.00005247575,0.002712834,0.00001745654,0.00004981984,0.0000377317,0.0004992885,0.000831648,0.9936574,0.0002237354,0.0001293992,0.00169755],"study_design_scores_gemma":[0.001181977,0.00009287363,0.02783164,0.00001166551,0.00004412992,0.0002570245,0.001133861,0.0004927869,0.9313108,0.0002725968,0.03688853,0.0004820644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9919526,0.001846934,0.004781632,0.0002758173,0.0002375659,0.0001935228,0.00002546947,0.000009640633,0.0006768441],"genre_scores_gemma":[0.993387,0.0003865439,0.003803521,0.001613586,0.0001078066,0.00001847721,0.0004576184,0.00002993292,0.0001955405],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06234648,"threshold_uncertainty_score":0.7815565,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01872264068227664,"score_gpt":0.2375158552000901,"score_spread":0.2187932145178135,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}