{"id":"W3159578401","doi":"10.1128/mra.00291-21","title":"Draft Genome Sequence of an Aeromonas salmonicida subsp. <i>salmonicida</i> Strain from the Canadian Pacific Coast Bearing a Variant of pRAS1","year":2021,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada; Institut universitaire de cardiologie et de pneumologie de Québec; Université Laval","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Aeromonas salmonicida; Plasmid; Subspecies; Whole genome sequencing; Biology; Strain (injury); Gene; Genome; Microbiology; Genetics; Bacteria; Zoology; Anatomy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003083179,0.0002262802,0.0003179366,0.00003786353,0.000317908,0.00004688869,0.0005739567,0.0001734269,0.001794976],"category_scores_gemma":[0.00002582955,0.0001937789,0.0001022863,0.0002829201,0.000500986,0.0001526403,0.0002936073,0.0002997955,0.00008484624],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003679252,"about_ca_system_score_gemma":0.0001753619,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1859317,"about_ca_topic_score_gemma":0.3752729,"domain_scores_codex":[0.9981305,0.0002439325,0.0004904285,0.0005183637,0.0001027004,0.0005140565],"domain_scores_gemma":[0.9988415,0.00006791463,0.0002677139,0.0006292808,0.00004937418,0.0001441691],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002562817,0.00012363,0.00604585,0.000005248402,0.0000808206,0.00006918078,0.001902061,0.0001644582,0.9906547,0.000008348511,0.0004957824,0.0004242983],"study_design_scores_gemma":[0.001145275,0.0004202652,0.06100746,0.0001568995,0.0001637291,0.0006296076,0.005242518,0.00008190735,0.08946764,0.00006728628,0.8409068,0.0007105892],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985997,0.0002262538,0.00002147532,0.0004859657,0.0001627635,0.0002477843,0.01060413,0.0000146219,0.002239981],"genre_scores_gemma":[0.9935643,0.00002414237,0.0004904069,0.0005897725,0.00003666897,0.00001102089,0.004623671,0.00002256414,0.0006374595],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9011871,"threshold_uncertainty_score":0.9991175,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01717949576368715,"score_gpt":0.2324096079871748,"score_spread":0.2152301122234876,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}