{"id":"W3159779329","doi":"10.1111/trf.16418","title":"<i>Staphylococcus epidermidis</i>undergoes global changes in gene expression during biofilm maturation in platelet concentrates","year":2021,"lang":"en","type":"article","venue":"Transfusion","topic":"Blood transfusion and management","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; Canadian Blood Services","funders":"Health Canada; Canadian Blood Services; Genome Canada","keywords":"Staphylococcus epidermidis; Gene; Biofilm; Biology; Microbiology; Gene expression; Transcriptome; Virulence; KEGG; Gene expression profiling; Tryptic soy broth; Bacteria; Staphylococcus aureus; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001378022,0.0002168282,0.0003569447,0.0001318857,0.00007245455,0.0000267636,0.00006634719,0.0001614089,0.0003511436],"category_scores_gemma":[0.00001602347,0.0001966025,0.00007671975,0.0005571121,0.0000349014,0.0001203324,0.00002929637,0.0002145187,0.00001357548],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001243165,"about_ca_system_score_gemma":0.00006616321,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002221808,"about_ca_topic_score_gemma":0.003914286,"domain_scores_codex":[0.9983853,0.0001002788,0.0003687316,0.0004764663,0.000291988,0.0003772776],"domain_scores_gemma":[0.9995213,0.00002736156,0.0000407666,0.0002453403,0.00004567884,0.0001195187],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009320772,0.0004567919,0.02649167,0.0003424939,0.00001602303,0.0009768658,0.0005389569,0.00007600389,0.9656727,0.0001180013,0.0000803084,0.004298126],"study_design_scores_gemma":[0.005183077,0.00006629142,0.1817797,0.0005208503,0.00002501618,0.0000589704,0.0006399135,0.0001029478,0.810782,0.0001065865,0.0005526739,0.0001819153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916216,0.001183029,0.0002579666,0.004646219,0.0002320227,0.0007176754,0.00001682603,0.00008772624,0.001236947],"genre_scores_gemma":[0.9915907,0.006812522,0.0006440482,0.0005689835,0.00007615204,0.00004971973,0.0001108871,0.00001877414,0.0001282345],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1552881,"threshold_uncertainty_score":0.8017218,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01321261826254512,"score_gpt":0.2520034708349503,"score_spread":0.2387908525724051,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}