{"id":"W3160117320","doi":"10.1093/botlinnean/boab012","title":"Genomic and niche divergence in an Amazonian palm species complex","year":2021,"lang":"en","type":"article","venue":"Botanical Journal of the Linnean Society","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Danmarks Frie Forskningsfond; Vetenskapsrådet; Ministry of Environment; Stiftelsen för Strategisk Forskning; Göteborgs Universitet; European Commission; Ministerio del Ambiente, Agua y Transición Ecológica; Universidad CES; David Rockefeller Center for Latin American Studies, Harvard University; Harvard University; European Research Council; Wenner-Gren Foundation","keywords":"Amazonian; Biology; Niche; Divergence (linguistics); Palm; Evolutionary biology; Environmental niche modelling; Ecology; Botany; Ecological niche; Amazon rainforest; Habitat","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001618847,0.00007053838,0.0001161056,0.000003917792,0.00008544237,0.00002916463,0.0002245546,0.00009604019,0.00005093191],"category_scores_gemma":[0.00004284527,0.00005322833,0.0001589747,0.00006538103,0.00009338859,0.000003130081,0.0002170175,0.000162764,6.464907e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001207187,"about_ca_system_score_gemma":0.00005243923,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001702139,"about_ca_topic_score_gemma":0.00003654835,"domain_scores_codex":[0.9993626,0.00009453845,0.0001981613,0.0001186672,0.0001216068,0.0001044267],"domain_scores_gemma":[0.9995465,0.00001029022,0.0001148278,0.0001665689,0.00009192461,0.00006987333],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002049241,0.0000242175,0.71215,0.000004108633,0.0000308539,0.000005091551,0.0002006098,0.0002020045,0.285538,0.00004289293,0.001499267,0.0002824824],"study_design_scores_gemma":[0.0003946926,0.00005573804,0.9794004,0.000007178669,0.00001883357,0.00008430927,0.0004623026,0.00006781214,0.005294036,0.0001973919,0.01394735,0.00006998171],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983938,0.0004116738,0.000156914,0.0007898624,0.0001555309,0.00002798785,0.0000124682,0.000001005122,0.00005075293],"genre_scores_gemma":[0.9963313,0.0003296141,0.002119401,0.0008004826,0.0002168252,8.551132e-8,0.00000459543,0.000004498382,0.0001932382],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.280244,"threshold_uncertainty_score":0.2170588,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0280618657480257,"score_gpt":0.2542818614501043,"score_spread":0.2262199957020786,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}