{"id":"W3160325452","doi":"10.1186/s13059-021-02339-6","title":"Functional mapping of androgen receptor enhancer activity","year":2021,"lang":"en","type":"article","venue":"Genome biology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Türkiye Bilimsel ve Teknolojik Araştırma Kurumu; Astellas Pharma; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; KWF Kankerbestrijding; Astellas Foundation for Research on Metabolic Disorders; Prostate Cancer Foundation","keywords":"Enhancer; Biology; Androgen receptor; Enhancer RNAs; Promoter; Transcription factor; Gene; Binding site; Regulation of gene expression; Regulatory sequence; Genetics; Transcription (linguistics); Gene expression; Molecular biology; Prostate cancer; Cancer","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003149273,0.0004175113,0.0002673755,0.001578034,0.000284032,0.0004111144,0.0004193102,0.0003123176,0.002522853],"category_scores_gemma":[0.0004599818,0.0001834936,0.0006434289,0.0005305629,0.0002946477,0.0001729333,0.0003121101,0.0005166462,0.0009643776],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003562798,"about_ca_system_score_gemma":0.0003216471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001020997,"about_ca_topic_score_gemma":0.001047995,"domain_scores_codex":[0.9997277,0.00003150904,0.00001333231,0.0001072062,0.00008113863,0.00003906575],"domain_scores_gemma":[0.9995183,0.000196234,0.00007708673,0.00005391846,0.00009443953,0.00005999039],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001396348,0.00004308279,0.002654777,0.0000989625,0.00001580655,0.00004209249,0.00003278285,0.0005030012,0.9888723,0.0004110038,0.00005557909,0.007130857],"study_design_scores_gemma":[0.00002942579,0.0003533691,0.06545208,0.00002539673,0.00007453033,0.001002486,0.00006089118,0.00769248,0.9192358,0.0007122951,0.005336016,0.00002526661],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9187787,0.002017559,0.06984391,0.00009778089,0.00002581371,0.00008890528,0.003850383,0.0006089304,0.004687998],"genre_scores_gemma":[0.952397,0.0004268501,0.03951734,0.00003484515,0.00001255365,0.00006764178,0.005537979,0.0001204641,0.001885365],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002522853,"threshold_uncertainty_score":0.008439779,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0575315143107429,"score_gpt":0.3209653406788414,"score_spread":0.2634338263680985,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}