{"id":"W3161178124","doi":"10.3390/microorganisms9051035","title":"Molecular Analysis of SARS-CoV-2 Circulating in Bangladesh during 2020 Revealed Lineage Diversity and Potential Mutations","year":2021,"lang":"en","type":"article","venue":"Microorganisms","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Clade; Lineage (genetic); Phylogenetic tree; Biology; Genetic diversity; Mutation; Phylogenetics; Virus; Evolutionary biology; Genetics; Mutation rate; Virology; Zoology; Gene; Medicine; Population","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002294321,0.0002519615,0.0002026495,0.0006891303,0.0002749539,0.0003726038,0.0001494339,0.0002937989,0.001123001],"category_scores_gemma":[0.0004945592,0.0001341997,0.0002218124,0.001160631,0.0001255337,0.0002553042,0.0001799206,0.0002145919,0.0005469369],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004942575,"about_ca_system_score_gemma":0.0002875348,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00904854,"about_ca_topic_score_gemma":0.01365836,"domain_scores_codex":[0.9997966,0.00002801263,0.00003031173,0.00005135499,0.00005241449,0.00004134123],"domain_scores_gemma":[0.9997669,0.00002977489,0.00008425345,0.00001393343,0.00006730891,0.00003777017],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00046515,0.00004313686,0.8404442,0.0001797172,0.00006475129,0.001028873,0.000887302,0.0005510587,0.1417293,0.0001178361,0.0005258306,0.01396289],"study_design_scores_gemma":[0.000008242213,0.0001480202,0.9889022,0.00004875734,0.00003761203,0.001082518,0.001203483,0.0004157563,0.004493129,0.00005928194,0.00358366,0.00001740663],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953368,0.000480659,0.000139996,0.00004610695,0.000004622382,0.00001717377,0.002910376,0.00000382424,0.001060358],"genre_scores_gemma":[0.9914905,0.0007775435,0.0005941566,0.00005377321,0.000004783589,0.00002630939,0.006283096,0.000004485519,0.0007652811],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00904854,"threshold_uncertainty_score":0.01799178,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02332941949311637,"score_gpt":0.3001845657347855,"score_spread":0.2768551462416691,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}