{"id":"W3161231854","doi":"10.1128/aem.00659-21","title":"Antimicrobial Resistance Gene Transfer from Campylobacter jejuni in Mono- and Dual-Species Biofilms","year":2021,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Campylobacter jejuni; Microbiology; Biofilm; Horizontal gene transfer; Biology; Salmonella enterica; Antibiotic resistance; Strain (injury); Campylobacter; Gene; Escherichia coli; Bacteria; Genetics; Antibiotics; Phylogenetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004384105,0.0003115025,0.0002113301,0.000405549,0.0002201785,0.0005373135,0.0002710295,0.0005186529,0.003045748],"category_scores_gemma":[0.001014224,0.0001949694,0.0001604835,0.0001209258,0.0001724429,0.0003770124,0.0009609167,0.0004780673,0.0002090351],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003698314,"about_ca_system_score_gemma":0.0003024663,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002219588,"about_ca_topic_score_gemma":0.002003666,"domain_scores_codex":[0.9993363,0.00009637725,0.00004239752,0.0001818725,0.0001864362,0.0001566349],"domain_scores_gemma":[0.9995449,0.0001333567,0.00005617026,0.00002726293,0.0001031546,0.0001351795],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002166608,0.0001293248,0.00450632,0.00006915755,0.00001574901,0.00005575517,0.0001365247,0.0000561592,0.9884638,0.00008393422,0.0001428786,0.006123672],"study_design_scores_gemma":[0.00008443109,0.003576352,0.2708308,0.0001338731,0.0001407565,0.001192696,0.002737056,0.01032555,0.7035522,0.00059389,0.006785998,0.00004631156],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977869,0.0003975183,0.0005957343,0.00009804624,0.0000354568,0.00002063173,0.00009319324,0.00001577176,0.0009568412],"genre_scores_gemma":[0.9956643,0.0001837717,0.001733005,0.00004638714,0.00001178511,0.000035916,0.0002353374,0.000004721644,0.002084887],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003045748,"threshold_uncertainty_score":0.010189,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00836118229011233,"score_gpt":0.1577585978844855,"score_spread":0.1493974155943732,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}