{"id":"W3161699122","doi":"10.1101/2021.03.24.21254180","title":"The gut microbiome and rotavirus vaccine immunogenicity in rural Zimbabwean infants","year":2021,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; BC Centre for Disease Control","funders":"","keywords":"Microbiome; Immunogenicity; Rotavirus; Seroconversion; Rotavirus vaccine; Biology; Immunology; Metagenomics; Antibody; Virus; Bioinformatics; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003310232,0.0002870456,0.0002025131,0.0003605326,0.0003291599,0.0004855049,0.0001842249,0.000200214,0.001364426],"category_scores_gemma":[0.001763376,0.0001646884,0.0002458875,0.0005107944,0.0002299619,0.0002880165,0.0005105978,0.0002853533,0.0001082708],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004768689,"about_ca_system_score_gemma":0.0002759505,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02752558,"about_ca_topic_score_gemma":0.02193186,"domain_scores_codex":[0.9997652,0.00009256779,0.00001296806,0.00004675252,0.00001976629,0.00006264681],"domain_scores_gemma":[0.9996725,0.0000692937,0.000175187,0.00001522844,0.00002861766,0.00003921125],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001705388,0.00002335511,0.9903039,0.0000775701,0.0001252464,0.0001607063,0.0007522723,0.000130161,0.002625911,0.00007597869,0.0002009517,0.005353386],"study_design_scores_gemma":[0.000004643102,0.00004337146,0.9988093,0.00002247596,0.00002782649,0.00007145727,0.0003774627,0.0002614456,0.00008881983,0.00003370703,0.0002572613,0.00000218481],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988484,0.0005880166,0.00009332878,0.00009189737,0.000001932355,0.000006568118,0.0002470714,0.000001733429,0.0001210188],"genre_scores_gemma":[0.999499,0.0001988939,0.00009179109,0.00002563644,0.000002107151,0.00001060939,0.0001040496,9.628516e-7,0.00006690042],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02752558,"threshold_uncertainty_score":0.05473071,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01880548806215486,"score_gpt":0.3122388998705903,"score_spread":0.2934334118084355,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}