{"id":"W3161866536","doi":"10.3390/biom11050738","title":"Metabolomics-Guided Hypothesis Generation for Mechanisms of Intestinal Protection by Live Biotherapeutic Products","year":2021,"lang":"en","type":"article","venue":"Biomolecules","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Crohn's and Colitis Canada; Michael Smith Health Research BC","keywords":"Lactobacillus reuteri; Bacteria; Oxidative stress; Inflammation; Colitis; Chemistry; Escherichia coli; Microbiology; Probiotic; Pharmacology; Biology; Biochemistry; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001409213,0.0001256411,0.0001448089,0.00003450955,0.00006801583,0.0000172577,0.00008195385,0.0001176193,0.00001043464],"category_scores_gemma":[0.0001681162,0.0001230778,0.00007225697,0.0001031907,0.00005471895,0.000002938498,0.00002989442,0.0000322267,0.000003512517],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001504424,"about_ca_system_score_gemma":0.0001753997,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003399793,"about_ca_topic_score_gemma":0.00002778241,"domain_scores_codex":[0.9991155,0.00006933416,0.0002173815,0.0003655941,0.00006206395,0.0001701815],"domain_scores_gemma":[0.9993042,0.000006631943,0.0001204181,0.0002426256,0.0002900634,0.00003601518],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003917891,0.00009453049,0.000006466303,0.00007541455,0.00005102812,4.424383e-7,0.00002358207,0.000001509083,0.9947852,0.0004250754,0.002109603,0.002387927],"study_design_scores_gemma":[0.0003643856,0.0002856644,0.00005277857,0.00001180556,0.0000353102,0.00003033913,0.00004419644,0.00009234839,0.991285,0.0002364301,0.007429788,0.0001319848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7692055,0.003537874,0.2239609,0.001883643,0.0002719534,0.0009103507,0.0001698823,0.00002241918,0.00003745505],"genre_scores_gemma":[0.9498523,0.0002177172,0.04830317,0.0004300335,0.0001825722,0.00009017724,0.0003874331,0.00003399258,0.0005026172],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1806467,"threshold_uncertainty_score":0.5018969,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04690393140468208,"score_gpt":0.2751043139117273,"score_spread":0.2282003825070452,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}