{"id":"W3162236250","doi":"10.1186/s13104-021-05600-0","title":"De novo transcriptome analysis for examination of the nutrition metabolic system related to the evolutionary process through which stick insects gain the ability of flight (Phasmatodea)","year":2021,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Co-creation place formation support program; National Bioscience Database Center; Institute of Genetics; Tokyo University of Agriculture and Technology; Japan Science and Technology Agency; Japan Society for the Promotion of Science; Tokyo University of Agriculture; Research Organization of Information and Systems","keywords":"Transcriptome; Biology; Insect; Midgut; Gene; RNA-Seq; Evolutionary biology; Genetics; Zoology; Larva; Gene expression; Botany","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001490701,0.0004239581,0.0004592693,0.0006785211,0.0004848932,0.0005158256,0.0001881591,0.0002768578,0.001314429],"category_scores_gemma":[0.0002218934,0.0001870342,0.0006343733,0.0007977441,0.0001361363,0.0003463031,0.0003553056,0.0005830826,0.0005645695],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002148791,"about_ca_system_score_gemma":0.0003799555,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006877909,"about_ca_topic_score_gemma":0.001961992,"domain_scores_codex":[0.9998972,0.000007371656,0.000007238355,0.00003994253,0.00002831367,0.00001980959],"domain_scores_gemma":[0.9998599,0.00002589308,0.00004099845,0.00001581824,0.00003570979,0.00002153524],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001340835,0.00003260256,0.003493306,0.0001938966,0.0000277808,0.0001487879,0.00007652478,0.0001660172,0.9901534,0.0001213851,0.0001576194,0.005294626],"study_design_scores_gemma":[0.00006486348,0.0007716162,0.5755236,0.0001810919,0.0007248324,0.001684413,0.001056433,0.01637241,0.3658276,0.001025133,0.03670689,0.00006114001],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9406455,0.003943887,0.02897305,0.0001951017,0.0001185995,0.0001509499,0.02277093,0.0003196924,0.002882253],"genre_scores_gemma":[0.86988,0.003736837,0.04865544,0.0002508047,0.0001129279,0.0003401853,0.0717846,0.0001871403,0.005052058],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001314429,"threshold_uncertainty_score":0.004397213,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09527542972488022,"score_gpt":0.3443025084128826,"score_spread":0.2490270786880023,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}