{"id":"W3162412060","doi":"10.1186/s13071-021-04750-1","title":"Monitoring the patterns of submission and presence of tick-borne pathogens in Ixodes scapularis collected from humans and companion animals in Ontario, Canada (2011–2017)","year":2021,"lang":"en","type":"article","venue":"Parasites & Vectors","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto Public Health; University of Guelph; Public Health Agency of Canada; University of Toronto; Public Health Ontario","funders":"","keywords":"Ixodes scapularis; Borrelia burgdorferi; Anaplasma phagocytophilum; Tick; Biology; Lyme disease; Borrelia; Tick-borne disease; Ixodes; Babesiosis; Veterinary medicine; Babesia; Anaplasmosis; Anaplasma; Virology; Ixodidae; Immunology; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001195626,0.0001627755,0.0003796223,0.000087719,0.00008504497,0.00001236275,0.0001125252,0.0001146614,0.0002908101],"category_scores_gemma":[0.0001711434,0.0001384885,0.00003153654,0.0001501424,0.000104535,0.00004970116,0.00009659553,0.0002247614,0.000001170117],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001275161,"about_ca_system_score_gemma":0.0003460914,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9501777,"about_ca_topic_score_gemma":0.9818732,"domain_scores_codex":[0.99872,0.0003171843,0.0003555055,0.0003040801,0.00006295235,0.0002402142],"domain_scores_gemma":[0.998957,0.0005395981,0.0001517527,0.0002359665,0.00008450079,0.00003113228],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004530964,0.00007866882,0.7219211,0.00002166988,0.00005459732,0.00001949541,0.001036176,0.00001737756,0.276651,0.000009094661,0.0000407356,0.0001047567],"study_design_scores_gemma":[0.0004922991,0.00004935732,0.8485129,0.0001641205,0.0000406483,0.0000104044,0.0004731395,0.000006507756,0.1500592,0.00002852994,0.00005485131,0.0001079866],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9919245,0.007510857,0.000004291398,0.00003210738,0.0001921943,0.0001884114,0.0001099821,0.000009704849,0.00002798572],"genre_scores_gemma":[0.999625,0.0002136109,0.00001626428,0.000006987112,0.000009284777,0.00001305431,0.00004864583,0.00001084504,0.00005626853],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1265918,"threshold_uncertainty_score":0.5647398,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01401094912154445,"score_gpt":0.2334176487808006,"score_spread":0.2194066996592561,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}