{"id":"W3163247164","doi":"10.1016/j.cell.2021.04.024","title":"Innovation, conservation, and repurposing of gene function in root cell type development","year":2021,"lang":"en","type":"article","venue":"Cell","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":116,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto","funders":"Division of Integrative Organismal Systems; Howard Hughes Medical Institute","keywords":"Biology; Arabidopsis; Meristem; Gene; Cell type; Repurposing; Cell biology; Transcription factor; Gene regulatory network; Function (biology); Regulation of gene expression; Cell; Botany; Genetics; Gene expression; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001644967,0.00003660548,0.00005873656,0.00001413844,0.00003643452,0.000008621541,0.00003526137,0.00004895102,0.00005093072],"category_scores_gemma":[0.00003974091,0.00001741529,0.000005125958,0.0005040785,0.00001885525,0.00002107653,0.0000298672,0.00004644035,0.000005395289],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008706218,"about_ca_system_score_gemma":0.00003199031,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002327604,"about_ca_topic_score_gemma":0.0002010605,"domain_scores_codex":[0.9995533,0.00004313723,0.0001380064,0.0001235995,0.00006036763,0.00008160279],"domain_scores_gemma":[0.9997122,0.00004230054,0.0000388977,0.00002222975,0.0001711025,0.00001329199],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001115577,0.00002669477,0.09134237,0.000005964587,0.000001276582,0.00000398732,0.00002369724,8.926619e-7,0.906469,0.00001851191,0.0001546745,0.001941736],"study_design_scores_gemma":[0.00006208403,0.00003045437,0.329621,0.000004709363,9.079694e-7,0.000002697029,0.00003586656,0.000009944953,0.6616875,0.0000554435,0.008455913,0.00003351125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984359,0.0004666908,0.00001347149,0.0001888309,0.0000311256,0.00005169586,0.000002030221,0.000005090411,0.0008052188],"genre_scores_gemma":[0.9988362,0.00002385887,0.0003588823,0.0001223469,0.00001163598,0.000002004504,0.0001668234,2.961496e-7,0.000477946],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2447816,"threshold_uncertainty_score":0.07101749,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0297328271695769,"score_gpt":0.2256110546449936,"score_spread":0.1958782274754167,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}