{"id":"W3163279211","doi":"10.1093/nar/gkab394","title":"OmicsAnalyst: a comprehensive web-based platform for visual analytics of multi-omics data","year":2021,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Genome Canada","keywords":"Bottleneck; Visual analytics; Personalization; Analytics; Cluster analysis; Computer science; Univariate; Visualization; Data analysis; Data science; Data mining; Multivariate statistics; Machine learning; World Wide Web","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005644994,0.003297722,0.002013942,0.007156795,0.001305775,0.005743362,0.003801277,0.002232568,0.04351603],"category_scores_gemma":[0.01006429,0.002089339,0.002408239,0.003875235,0.001077641,0.006468507,0.007604265,0.004806335,0.03844814],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001126455,"about_ca_system_score_gemma":0.002873082,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002521069,"about_ca_topic_score_gemma":0.003940281,"domain_scores_codex":[0.9977062,0.0003455955,0.0002004681,0.000442235,0.001104646,0.0002007177],"domain_scores_gemma":[0.9929895,0.002970008,0.0006292991,0.001165099,0.001320387,0.0009257634],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001631475,0.0004201885,0.004020882,0.003687305,0.0006421593,0.000959496,0.001332425,0.003440054,0.06508709,0.01729074,0.6488283,0.2526598],"study_design_scores_gemma":[0.0005008454,0.0002144629,0.008030966,0.001228297,0.0002250293,0.001132322,0.0004306289,0.03995054,0.04808896,0.06454542,0.8349375,0.0007149868],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.004244155,0.002198202,0.4133902,0.001744845,0.000648569,0.000779437,0.058637,0.50569,0.0126676],"genre_scores_gemma":[0.02451616,0.003248776,0.7377935,0.002856217,0.0006232269,0.002764358,0.1218375,0.08861634,0.01774384],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.04351603,"threshold_uncertainty_score":0.1455756,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1096683964583346,"score_gpt":0.3872323548176621,"score_spread":0.2775639583593275,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}