{"id":"W3163603360","doi":"10.3390/microorganisms9051037","title":"The Influence of Diet and Sex on the Gut Microbiota of Lean and Obese JCR:LA-cp Rats","year":2021,"lang":"en","type":"article","venue":"Microorganisms","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Alberta; St. Boniface Hospital; University of Manitoba","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; U.S. Department of Veterans Affairs","keywords":"Firmicutes; Gut flora; Biology; Bacteroidetes; Obesity; Eubacterium; Dysbiosis; Butyrate; Feces; Propionate; Food science; Endocrinology; Fermentation; Microbiology; Immunology; Genetics; 16S ribosomal RNA; Biochemistry; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002145458,0.0001179074,0.0001392485,0.000012321,0.000144253,0.00002390687,0.0001496478,0.0001072311,0.000009656979],"category_scores_gemma":[0.00006099745,0.00007537456,0.00003466025,0.00006803263,0.0003244031,0.000001895297,0.0001900571,0.0001048351,0.000001815483],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004839555,"about_ca_system_score_gemma":0.00009639077,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003446002,"about_ca_topic_score_gemma":0.00006549194,"domain_scores_codex":[0.9992858,0.0000796382,0.0001919529,0.000227173,0.00004737684,0.0001681036],"domain_scores_gemma":[0.9993727,0.00006663615,0.00009133699,0.0003549409,0.00007455189,0.00003986166],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003254793,0.0000326079,0.0009686282,0.00004268142,0.00002827052,0.000001860318,0.0002306963,0.000002493033,0.9970786,0.0002754594,0.0009625306,0.0003436408],"study_design_scores_gemma":[0.0002260909,0.0002010379,0.01751374,0.00003392906,0.00001279621,0.00004213445,0.0003043137,5.422058e-7,0.9661011,0.00009464072,0.01538591,0.00008374287],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965764,0.002294196,0.000005702726,0.0007586681,0.00002882274,0.0001151731,0.00003776685,0.000002693164,0.0001805628],"genre_scores_gemma":[0.996685,0.001909678,0.000131306,0.0005177945,0.00002440918,0.000001733037,0.00001444416,0.00001443539,0.0007012192],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03097746,"threshold_uncertainty_score":0.3073685,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004862190316246663,"score_gpt":0.221641449651857,"score_spread":0.2167792593356104,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}