{"id":"W3163892881","doi":"10.3390/metabo11050303","title":"A Comprehensive Targeted Metabolomics Assay for Crop Plant Sample Analysis","year":2021,"lang":"en","type":"article","venue":"Metabolites","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Canada Foundation for Innovation; Genome Canada","keywords":"Metabolomics; Chromatography; Metabolite; Chemistry; Selected reaction monitoring; Metabolome; Sample preparation; Crop; Tandem mass spectrometry; Mass spectrometry; Biology; Biochemistry; Agronomy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002944347,0.000290039,0.0007314789,0.000174947,0.0001912007,0.00007129544,0.0002072273,0.0001375674,0.0001075083],"category_scores_gemma":[0.0008344058,0.0002637864,0.0006011481,0.0007063788,0.00007780309,0.000005296262,0.0001967656,0.00008804135,0.000005344828],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009379487,"about_ca_system_score_gemma":0.00009348917,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003863652,"about_ca_topic_score_gemma":0.00007574617,"domain_scores_codex":[0.9981794,0.0001518187,0.0003733133,0.0006612677,0.0001662409,0.0004679984],"domain_scores_gemma":[0.9985104,0.0001775852,0.0001459021,0.0005694421,0.0004806336,0.0001160374],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001046649,0.0001316829,0.006796825,0.00004120787,0.005310711,0.000004147971,0.00004764096,0.0001378777,0.976031,0.007096091,0.003348683,0.0009494639],"study_design_scores_gemma":[0.0005364136,0.00004341192,0.006658897,0.000001318843,0.001148534,0.00000419186,0.0001059762,0.0002943924,0.4288805,0.0006782623,0.5613831,0.0002650359],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7951909,0.09605047,0.1030352,0.0003942201,0.0006664876,0.0004426617,0.00359214,0.00004726915,0.0005806567],"genre_scores_gemma":[0.791231,0.01245805,0.1796243,0.001944117,0.000979363,0.0002809442,0.0100798,0.00009954464,0.003302892],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5580344,"threshold_uncertainty_score":0.9999815,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01852561404809744,"score_gpt":0.2655221466677677,"score_spread":0.2469965326196703,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}