{"id":"W3164897324","doi":"10.1093/infdis/jiab291","title":"Cellular Activation, Differentiation, and Proliferation Influence the Dynamics of Genetically Intact Proviruses Over Time","year":2021,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; National Health and Medical Research Council; University of California, San Francisco; Australian Centre for HIV and Hepatitis Virology Research; Delaney AIDS Research Enterprise","keywords":"Provirus; Biology; Effector; Virology; Cellular differentiation; Virus; Immunology; Cell biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009975776,0.0001899712,0.0002559037,0.0003018688,0.00027029,0.0006680332,0.0002038907,0.0003681854,0.001009425],"category_scores_gemma":[0.003029687,0.0002078486,0.0001129479,0.0002162255,0.0003170545,0.0004850948,0.0003465669,0.0003210807,0.0001794171],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001724549,"about_ca_system_score_gemma":0.0001934052,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006561339,"about_ca_topic_score_gemma":0.0009277959,"domain_scores_codex":[0.9995174,0.0001779076,0.00002799396,0.0001001096,0.00008788834,0.00008864637],"domain_scores_gemma":[0.9988122,0.0005199368,0.0002976734,0.00009222677,0.0001778252,0.0001002697],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002688837,0.0001646107,0.6600881,0.0001012148,0.00005462999,0.0003379169,0.001732903,0.0005353548,0.3027635,0.0001975547,0.00007361496,0.03126173],"study_design_scores_gemma":[0.00001874556,0.001288927,0.9586675,0.0000240769,0.00007388209,0.0008315514,0.00119599,0.001245384,0.03530443,0.0004929079,0.0008375169,0.0000190992],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992093,0.0002030912,0.0002648753,0.00001382037,0.000001900128,0.000005848343,0.00002549369,0.000003441121,0.0002722278],"genre_scores_gemma":[0.9993678,0.00006456507,0.0002854524,0.0000101267,0.000002811708,0.0000102449,0.00003127599,0.000002426577,0.0002253166],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001009425,"threshold_uncertainty_score":0.005275726,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004377111555892601,"score_gpt":0.2249654388034711,"score_spread":0.2205883272475785,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}