{"id":"W3164956422","doi":"10.1016/s2666-5247(21)00094-x","title":"Ongoing diphtheria outbreak in Yemen: a cross-sectional and genomic epidemiology study","year":2021,"lang":"en","type":"article","venue":"The Lancet Microbe","topic":"Diphtheria, Corynebacterium, and Tetanus","field":"Biochemistry, Genetics and Molecular Biology","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University Health Network; Mount Sinai Hospital","funders":"Agence Nationale de la Recherche; Médecins Sans Frontières; Institut Pasteur; World Health Organization","keywords":"Outbreak; Diphtheria; Corynebacterium diphtheriae; Medicine; Epidemiology; Vaccination; Virology; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008286526,0.0005656802,0.0003667255,0.001145487,0.0008634548,0.0006716727,0.0003653618,0.0006807911,0.001876036],"category_scores_gemma":[0.001205696,0.0005165144,0.0003641102,0.001772532,0.0004806849,0.0009221617,0.0008430455,0.0003669882,0.000276786],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001015423,"about_ca_system_score_gemma":0.000797613,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0114167,"about_ca_topic_score_gemma":0.01175074,"domain_scores_codex":[0.9993626,0.0001685759,0.00006846609,0.0001544471,0.00004622135,0.0001995964],"domain_scores_gemma":[0.9993947,0.00008431756,0.000223961,0.00005674261,0.0001250975,0.0001151781],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005176411,0.00003991096,0.9977794,0.00002483527,0.00004654069,0.0003014901,0.0005113777,0.00002832668,0.0003455397,0.00001549489,0.0001223813,0.0007329067],"study_design_scores_gemma":[0.000006226951,0.0001316362,0.9966033,0.00001792358,0.00003839273,0.0006626306,0.001982121,0.00009305641,0.00008233089,0.00001072166,0.0003660313,0.000005635946],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988637,0.0001398597,0.0001015895,0.0000556968,0.000003032261,0.00003023032,0.0006351912,0.000003477374,0.0001672723],"genre_scores_gemma":[0.9987223,0.0001640004,0.0001981491,0.00008170587,0.00000825211,0.00005079865,0.0006733128,0.00000243708,0.00009902008],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0114167,"threshold_uncertainty_score":0.02270049,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04301400959554588,"score_gpt":0.3227542500985325,"score_spread":0.2797402405029866,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}