{"id":"W3165002431","doi":"10.1371/journal.pmed.1003605","title":"Vitamin D and COVID-19 susceptibility and severity in the COVID-19 Host Genetics Initiative: A Mendelian randomization study","year":2021,"lang":"en","type":"article","venue":"PLoS Medicine","topic":"Vitamin D Research Studies","field":"Medicine","cited_by":122,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Guy's and St Thomas' NHS Foundation Trust; Medical Research Council; Fonds de Recherche du Québec - Santé; Wellcome Trust; Canada Excellence Research Chairs, Government of Canada; National Institute for Health and Care Research; Jewish General Hospital; Public Health Agency; European Commission; King's College London; Canadian Institutes of Health Research; Compute Canada; National Institutes of Health; Public Health Agency of Canada; Japan Society for the Promotion of Science; NIHR BioResource; Cancer Research UK","keywords":"Mendelian randomization; Genome-wide association study; Medicine; Odds ratio; Vitamin D and neurology; Confounding; Population; Single-nucleotide polymorphism; Internal medicine; Genetics; Biology; Genotype; Genetic variants; Environmental health","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.002885455,0.0002379042,0.000707011,0.0001946919,0.0002726123,0.00002389883,0.0001135454,0.00008328205,0.0001717384],"category_scores_gemma":[0.02686429,0.0001479706,0.00002937011,0.00069236,0.0008001433,0.00006499181,0.0002220169,0.0004146548,0.000002127048],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002504768,"about_ca_system_score_gemma":0.0005516131,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002818269,"about_ca_topic_score_gemma":0.002182427,"domain_scores_codex":[0.9965251,0.001246488,0.0004777624,0.0005706047,0.0008496483,0.0003303679],"domain_scores_gemma":[0.9963586,0.002278404,0.00009618601,0.0004811223,0.0002503575,0.000535288],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009532417,0.001587446,0.916249,0.001433098,0.0003384133,0.001355395,0.06741512,0.000005579882,0.003732942,0.00002799499,0.006215915,0.0006858765],"study_design_scores_gemma":[0.05655286,0.002105732,0.8364289,0.0001815463,0.0005828836,0.0002763972,0.09957998,0.001002898,0.0003218336,0.0003768565,0.002320556,0.0002695211],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9274664,0.003221833,0.000452064,0.06598476,0.0000470002,0.002316943,0.00002467006,0.00004163528,0.000444716],"genre_scores_gemma":[0.9853953,0.002905769,0.0001287807,0.01107015,0.0001621988,0.0001443453,0.00005030764,0.00001699889,0.0001261336],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07982004,"threshold_uncertainty_score":0.9813328,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09474353781392483,"score_gpt":0.3879969102706967,"score_spread":0.2932533724567719,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}