{"id":"W3165005869","doi":"10.1172/jci.insight.148855","title":"Epitope-specific antibody responses differentiate COVID-19 outcomes and variants of concern","year":2021,"lang":"en","type":"article","venue":"JCI Insight","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":true,"ca_institutions":"London Health Sciences Centre; University of Toronto; Structural Genomics Consortium; Western University","funders":"University of Toronto; London Health Sciences Foundation; Academic Medical Organization of Southwestern Ontario; Lawson Health Research Institute; University of Texas at Austin","keywords":"Epitope; Antibody; Virology; Antigen; Serology; Immunology; Linear epitope; Biology; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005569702,0.0002969659,0.000248232,0.0005735426,0.0001334582,0.000411066,0.0001544483,0.0002696603,0.001935646],"category_scores_gemma":[0.001173708,0.00005590848,0.0002006178,0.0003326262,0.000193323,0.0002638117,0.0003398615,0.0003461849,0.0002778243],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002120576,"about_ca_system_score_gemma":0.00007337831,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003449436,"about_ca_topic_score_gemma":0.0003619569,"domain_scores_codex":[0.9996855,0.00005427327,0.00003801335,0.00007055068,0.00006910618,0.00008249697],"domain_scores_gemma":[0.9993475,0.0001178538,0.0003098898,0.00003016181,0.0001015823,0.0000930056],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007610603,0.00008465759,0.9652366,0.00004658835,0.00004539903,0.0003386753,0.000100916,0.0001145108,0.02093586,0.000116447,0.0002470965,0.01197217],"study_design_scores_gemma":[0.00001608948,0.0008060011,0.9883102,0.00001499723,0.00003485245,0.001615202,0.0001513171,0.0005536686,0.007417866,0.0001729807,0.0009010065,0.000005855858],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974396,0.0004448764,0.0004823281,0.00004347528,0.00001177777,0.00002048576,0.0002718919,0.00001377047,0.001271801],"genre_scores_gemma":[0.9991797,0.00008757656,0.0002055065,0.00003709035,0.00001022001,0.000007146178,0.0003278728,0.000003924239,0.0001408913],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001935646,"threshold_uncertainty_score":0.006475449,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1080357602708922,"score_gpt":0.4043124342308227,"score_spread":0.2962766739599306,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}