{"id":"W3167611988","doi":"10.3389/fvets.2021.610375","title":"Epitope Peptide-Based Predication and Other Functional Regions of Antigenic F and HN Proteins of Waterfowl and Poultry Avian Avulavirus Serotype-1 Isolates From Uganda","year":2021,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Université de Toulouse; Institut National de la Recherche Agronomique; M.S.I. Foundation; World Bank Group","keywords":"Epitope; Biology; Virology; Serotype; Influenza A virus subtype H5N1; Waterfowl; Phylogenetic tree; Newcastle disease; Antigen; Genetics; Virus; Gene; Ecology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001550311,0.00008156839,0.0001835581,0.0001224341,0.00008134588,0.000008529621,0.0000540378,0.00006119434,0.000025367],"category_scores_gemma":[0.00008769411,0.00007095564,0.00001929132,0.0002231303,0.0009592117,0.000157619,0.00005497128,0.00008129031,4.104274e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001243701,"about_ca_system_score_gemma":0.000179627,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000571231,"about_ca_topic_score_gemma":0.00000283713,"domain_scores_codex":[0.999249,0.00004923754,0.0001685393,0.0002866108,0.0001219325,0.0001246413],"domain_scores_gemma":[0.9996084,0.0000229074,0.0000666551,0.0001650372,0.0000528698,0.00008411954],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004209731,0.0000827344,0.7310153,0.00007116771,0.00001267181,0.00001307897,0.000176146,0.000003634793,0.2670445,0.00002456843,0.00005451444,0.001080815],"study_design_scores_gemma":[0.0008560745,0.0007641609,0.9880147,0.0001736435,0.00003448813,0.00003738815,0.0002939926,0.001152469,0.007858943,0.0005153365,0.0002265674,0.00007221934],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995524,0.00247422,0.001286932,0.0003205101,0.0001119215,0.0001808012,0.00004555181,0.000008227186,0.00004783694],"genre_scores_gemma":[0.9941101,0.0001643149,0.005445858,0.00015847,0.00001796482,0.000008126566,0.00001244251,0.000005116895,0.0000775991],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2591855,"threshold_uncertainty_score":0.3534256,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02411899993859948,"score_gpt":0.2656708932972953,"score_spread":0.2415518933586958,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}