{"id":"W3169754931","doi":"10.1101/2021.06.07.447207","title":"DNA transposon expansion is associated with genome size increase in mudminnows","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"Erasmus+; Universität Innsbruck; Grantová Agentura České Republiky; European Commission","keywords":"Genome; Biology; Genome size; Transposable element; Genome evolution; Genetics; Evolutionary biology; Lineage (genetic); Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008860895,0.000139542,0.0002000066,0.0009330492,0.0002095737,0.000266469,0.000136915,0.0002783527,0.001319143],"category_scores_gemma":[0.0002615863,0.0001349848,0.000248826,0.0004452972,0.0001829541,0.0002268694,0.0003508685,0.0002534921,0.0002370325],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002741009,"about_ca_system_score_gemma":0.0001201644,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001391208,"about_ca_topic_score_gemma":0.001973184,"domain_scores_codex":[0.9998868,0.000004488764,0.00000856839,0.00005555058,0.00002519877,0.00001948436],"domain_scores_gemma":[0.9996977,0.00003764988,0.000170959,0.00001283056,0.00003461735,0.00004631461],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002453467,0.00001582769,0.07767417,0.00007768292,0.00002382707,0.0001193212,0.000150254,0.0001502153,0.916764,0.00007839013,0.00005641193,0.004644593],"study_design_scores_gemma":[0.000004357126,0.000118742,0.9566857,0.000009747626,0.00002920056,0.0004240283,0.0001680248,0.0006469213,0.04057163,0.00007900898,0.001251569,0.0000110558],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986148,0.0002604465,0.0004163618,0.00001343431,0.0000035934,0.000003150897,0.0003877331,0.000026034,0.000274389],"genre_scores_gemma":[0.9980265,0.0001058781,0.0006105195,0.00002105748,0.000004611193,0.000007487625,0.0006305884,0.000007757933,0.000585528],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001391208,"threshold_uncertainty_score":0.004412949,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01200010532905704,"score_gpt":0.186738838843268,"score_spread":0.1747387335142109,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}