{"id":"W3170114335","doi":"10.1101/2021.05.31.446370","title":"Breaching the cell-envelope barriers of gram-positive and fungal microbes by a type VI secretion system in <i>Acidovorax citrulli</i>","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Type VI secretion system; Microbiology; Biology; Cell envelope; Effector; Escherichia coli; Candida albicans; Pseudomonas aeruginosa; Secretion; Bacteria; Cell biology; Biochemistry; Virulence; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001780785,0.0002729329,0.0002298277,0.00009002575,0.0001263989,0.0003448413,0.0002171542,0.0003038412,0.000461962],"category_scores_gemma":[0.000116749,0.00008756819,0.0002944317,0.0001056991,0.0001396021,0.000175146,0.0002651499,0.0003701279,0.0002205019],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000199665,"about_ca_system_score_gemma":0.0001498018,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005870336,"about_ca_topic_score_gemma":0.0004256123,"domain_scores_codex":[0.9998387,0.00002869507,0.00002142147,0.00003277105,0.00005116464,0.00002722778],"domain_scores_gemma":[0.9999467,0.000006280328,0.00001891423,0.000006661057,0.000008296677,0.0000130216],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003759592,0.00001072737,0.0002035101,0.00002246052,0.000002901506,0.00003267761,0.000008742693,0.00006921658,0.9990249,0.00002962521,0.00001248246,0.0005452529],"study_design_scores_gemma":[0.000004604437,0.0001770855,0.002243355,0.000006404161,0.000007361519,0.0001769721,0.0000273925,0.001250117,0.994932,0.00002046119,0.001150078,0.000004149817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957396,0.0005007177,0.002914471,0.00005622607,0.00001848206,0.00002169081,0.0001429916,0.00004925226,0.0005565105],"genre_scores_gemma":[0.9923218,0.0002558112,0.005205191,0.0000450059,0.000004262819,0.00001727825,0.0004084687,0.00001560002,0.001726667],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005870336,"threshold_uncertainty_score":0.001545429,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005056891374584154,"score_gpt":0.2024106507949313,"score_spread":0.1973537594203472,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}