{"id":"W3171360477","doi":"10.1016/j.mcpro.2021.100096","title":"Proteomic Portraits Reveal Evolutionarily Conserved and Divergent Responses to Spinal Cord Injury","year":2021,"lang":"en","type":"article","venue":"Molecular & Cellular Proteomics","topic":"Spinal Cord Injury Research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"Prevention of Organ Failure; University of Victoria; Université de Montréal; London Health Sciences Centre; Centre Hospitalier Universitaire Sainte-Justine; Dalhousie University; University of British Columbia; International Collaboration On Repair Discoveries; St. Michael's Hospital; Canada's Michael Smith Genome Sciences Centre; University of Toronto; Western University; Hôpital du Sacré-Cœur de Montréal; Vancouver Spine Surgery Institute","funders":"University of British Columbia; Genome British Columbia; Michael Smith Health Research BC; Western Canada Research Grid; Rick Hansen Institute; Fondation Brain Canada; VGH and UBC Hospital Foundation; Compute Canada; Canadian Institutes of Health Research; Genome Canada; Wings for Life","keywords":"Spinal cord injury; Medicine; Cerebrospinal fluid; Glial fibrillary acidic protein; Spinal cord; Clinical trial; Biomarker; Neuroscience; Bioinformatics; Biology; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007041686,0.0003597575,0.0005240927,0.0002746422,0.0002118653,0.00008645731,0.0002163839,0.0002207298,0.0001649816],"category_scores_gemma":[0.001029729,0.0003824256,0.0001897637,0.0006155992,0.0001916049,0.0000831536,0.0005113897,0.0005967855,0.0001399475],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002814581,"about_ca_system_score_gemma":0.001192328,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007251077,"about_ca_topic_score_gemma":0.000003455961,"domain_scores_codex":[0.9967308,0.0003458785,0.0005396939,0.000882772,0.0008203142,0.0006805146],"domain_scores_gemma":[0.9977715,0.00002064202,0.0001134258,0.0007917627,0.0006508047,0.0006518738],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.01941876,0.0001782409,0.00616277,0.0002149972,0.0001090518,0.002696305,0.00002000075,0.000001569604,0.9681102,0.0004236771,0.0007309982,0.001933399],"study_design_scores_gemma":[0.001142388,0.00670442,0.03795085,0.0002502907,0.000109055,0.0006394284,0.00004425994,0.00008039728,0.9492151,0.0003675001,0.003105814,0.0003905029],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9856086,0.001069221,0.005700019,0.004088771,0.0001464804,0.002946905,0.00005566297,0.00008965578,0.0002946694],"genre_scores_gemma":[0.949985,0.00005183499,0.04498958,0.00146799,0.000125078,0.0003397415,0.00007327082,0.00008520726,0.002882261],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03928956,"threshold_uncertainty_score":0.9998628,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03513812845756462,"score_gpt":0.3373143581185436,"score_spread":0.302176229660979,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}