{"id":"W3171594358","doi":"10.1099/ijsem.0.004831","title":"Bradyrhizobium septentrionale sp. nov. (sv. septentrionale) and Bradyrhizobium quebecense sp. nov. (sv. septentrionale) associated with legumes native to Canada possess rearranged symbiosis genes and numerous insertion sequences","year":2021,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Bradyrhizobium; Phylogenetic tree; Genetics; Phylogenetics; Gene; Plasmid; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009392048,0.0004317155,0.0001956732,0.0004816635,0.0003976911,0.0003825243,0.0001972523,0.0002106761,0.0005474994],"category_scores_gemma":[0.0002512551,0.0001161458,0.0001388575,0.000489313,0.0001543657,0.0001211856,0.0002130601,0.0002095388,0.0002174691],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008174847,"about_ca_system_score_gemma":0.001143666,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1382201,"about_ca_topic_score_gemma":0.2609095,"domain_scores_codex":[0.9998517,0.00000676039,0.00001049861,0.00003553505,0.00005198081,0.00004355008],"domain_scores_gemma":[0.9997881,0.00001709962,0.00006166156,0.00001499379,0.00006449552,0.00005372301],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004221413,0.00006551707,0.08712688,0.0002888674,0.00005001331,0.0006353709,0.000362353,0.0003451508,0.8922099,0.0001572329,0.0002732477,0.01806325],"study_design_scores_gemma":[0.00002196093,0.0002300912,0.9171183,0.00003287107,0.00007341249,0.001895499,0.0005889486,0.0006313708,0.07253903,0.00005814073,0.006787044,0.00002332829],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959487,0.0006886733,0.0005861851,0.00003647977,0.00001125816,0.00002970523,0.001503546,0.00002413142,0.001171379],"genre_scores_gemma":[0.9888029,0.0005279958,0.002288101,0.00004215959,0.000005044969,0.00001846375,0.005927091,0.000005853466,0.002382516],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8617799,"threshold_uncertainty_score":0.2748312,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01028553669928785,"score_gpt":0.2006322531415542,"score_spread":0.1903467164422664,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}