{"id":"W3172518383","doi":"10.1038/s41564-021-00917-9","title":"Genomic insights into diverse bacterial taxa that degrade extracellular DNA in marine sediments","year":2021,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Universität Konstanz; Universität Wien; Hebrew University of Jerusalem; Austrian Science Fund; ArcticNet; Genome Canada","keywords":"Biology; DNA; Metagenomics; Extracellular; Environmental DNA; Bacteria; Taxon; genomic DNA; Evolutionary biology; Genetics; Gene; Ecology; Biodiversity","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001564067,0.0002348329,0.0003493742,0.00006709031,0.0001826621,0.00001058642,0.0004812762,0.0009442968,0.01723621],"category_scores_gemma":[0.00003842804,0.0002257976,0.00008339534,0.0002060573,0.000347123,0.0000894663,0.001309008,0.001131279,0.0007931275],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002451474,"about_ca_system_score_gemma":0.00003748718,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003338153,"about_ca_topic_score_gemma":0.0123465,"domain_scores_codex":[0.9982161,0.0006000162,0.0002372346,0.0004896849,0.00003475051,0.0004222204],"domain_scores_gemma":[0.9992871,0.0001076606,0.0001052907,0.0004217474,0.00001046645,0.00006777403],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000963177,0.0001638135,0.03490483,0.000006227036,0.00002597956,0.0001179265,0.0004868061,0.00001431477,0.9595692,0.00009217048,0.00402499,0.000497456],"study_design_scores_gemma":[0.001950341,0.0001474477,0.1609461,0.00001187658,0.00003012035,0.000186609,0.0001650327,0.000006797678,0.3959026,0.002216194,0.4379115,0.0005254134],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968168,0.0004040388,0.000004069308,0.0003139913,0.001135419,0.0001715736,0.00001703761,0.00002393261,0.001113184],"genre_scores_gemma":[0.9959067,0.00009864728,0.0008072926,0.001276331,0.00008086846,0.000007516496,0.001012053,0.00001559846,0.0007950195],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5636666,"threshold_uncertainty_score":0.9999849,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00764348765258848,"score_gpt":0.2097195344888246,"score_spread":0.2020760468362361,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}