{"id":"W3172882741","doi":"10.6000/1927-520x.2021.10.04","title":"Multi-OMICS and Molecular Biology Perspective in Buffalo Genome","year":2021,"lang":"en","type":"article","venue":"Journal of Buffalo Science","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Genome; Genetics; Reference genome; Genetic diversity; Single-nucleotide polymorphism; SNP genotyping; Genotyping; Computational biology; Whole genome sequencing; Genomics; Gene; Genotype; Population","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004256932,0.000100192,0.0001599173,0.0001015368,0.00005899426,0.00003042814,0.0002863933,0.00008096373,0.000007281316],"category_scores_gemma":[0.000333642,0.00009075016,0.00005256535,0.0002451557,0.0004498104,0.000009314438,0.0001506207,0.0001511479,0.000001197941],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003666211,"about_ca_system_score_gemma":0.0005040721,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001821098,"about_ca_topic_score_gemma":0.0000143697,"domain_scores_codex":[0.9990529,0.00005503774,0.0002475532,0.0002794573,0.0001345901,0.0002304516],"domain_scores_gemma":[0.9991726,0.00001301326,0.00013141,0.0001793859,0.000381224,0.0001223615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002058645,0.00007110482,0.003041382,0.000003521602,0.00001261747,0.00001481035,0.0002724097,0.0003174362,0.9902657,0.005555185,0.00001195746,0.0004132853],"study_design_scores_gemma":[0.002736547,0.00142262,0.4659232,0.0000416027,0.0000417092,0.001380586,0.003634089,0.0001425078,0.4985947,0.02100613,0.004549664,0.0005265941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9584048,0.008627066,0.03183185,0.0003297379,0.0002182238,0.00005316302,0.000006078359,0.00000144491,0.0005276176],"genre_scores_gemma":[0.9149172,0.0002077354,0.08450373,0.0002339911,0.00008419782,8.469913e-7,0.000001349701,0.00000642822,0.00004447133],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.491671,"threshold_uncertainty_score":0.3700684,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01108861074727973,"score_gpt":0.2822451030944979,"score_spread":0.2711564923472181,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}