{"id":"W3173784737","doi":"10.1371/journal.pcbi.1009072","title":"Examining the dynamics of Epstein-Barr virus shedding in the tonsils and the impact of HIV-1 coinfection on daily saliva viral loads","year":2021,"lang":"en","type":"article","venue":"PLoS Computational Biology","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; BC Children's Hospital; University of British Columbia","funders":"Fogarty International Center; National Institute of Allergy and Infectious Diseases; Fred Hutchinson Cancer Research Center; Natural Sciences and Engineering Research Council of Canada; Compute Canada; Canadian Institutes of Health Research; Emory University; National Cancer Institute; National Institutes of Health; Western Canada Research Grid; Doris Duke Charitable Foundation; Foundation for the National Institutes of Health","keywords":"Coinfection; Saliva; Viral load; Immunology; Immune system; Virus; Epstein–Barr virus; Viral shedding; Cohort; Virology; Biology; Medicine; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002047201,0.0004927173,0.0005581617,0.0003862244,0.0002704384,0.001060011,0.0007007489,0.0006695942,0.001484592],"category_scores_gemma":[0.008835379,0.0004511595,0.00105767,0.0003109234,0.0004580821,0.001093509,0.0006833399,0.000724273,0.0001350937],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007660175,"about_ca_system_score_gemma":0.0007897662,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008834819,"about_ca_topic_score_gemma":0.005311943,"domain_scores_codex":[0.9994804,0.0002523983,0.00002362374,0.0001192625,0.00005745408,0.00006690819],"domain_scores_gemma":[0.997693,0.001695094,0.0003599909,0.0001083,0.00009185183,0.00005171472],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"observational","study_design_scores_codex":[0.000312947,0.000184629,0.1316228,0.0002131054,0.0003504352,0.0003833261,0.0004613845,0.8270434,0.008495193,0.01216147,0.0002138801,0.01855735],"study_design_scores_gemma":[0.00001306613,0.0001743171,0.01996272,0.00002721564,0.0000530275,0.0001659234,0.0001805465,0.973217,0.001065072,0.004789663,0.0003292071,0.00002225474],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9388416,0.0003242121,0.05913517,0.0002271644,0.000009185369,0.0000600019,0.0002221999,0.00002936808,0.001151127],"genre_scores_gemma":[0.991683,0.0002386076,0.007073584,0.00002711229,0.000004304589,0.00006591903,0.0001573008,0.000008210553,0.0007419089],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008834819,"threshold_uncertainty_score":0.01756674,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02023523959416917,"score_gpt":0.2911518001852256,"score_spread":0.2709165605910564,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}