{"id":"W3174236001","doi":"10.1128/msystems.01269-20","title":"Structure of Chimpanzee Gut Microbiomes across Tropical Africa","year":2021,"lang":"en","type":"article","venue":"mSystems","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Concordia University","funders":"National Park Service; Uganda National Council for Science and Technology; Agence Nationale Des Parcs Nationaux; Centre National de la Recherche Scientifique; University of Colorado Boulder; Tanzania Commission for Science and Technology; Max-Planck-Gesellschaft; Deutsche Forschungsgemeinschaft","keywords":"Microbiome; Biology; Primate; Gut microbiome; Archaea; Gut flora; Gut bacteria; Evolutionary biology; Ecology; Zoology; Bacteria; Genetics; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003894155,0.0001177109,0.0002253834,0.000015001,0.00006118239,0.00001883463,0.0001345539,0.000188559,0.0000399642],"category_scores_gemma":[0.00002269221,0.000104119,0.00009641995,0.00009916488,0.00005378836,0.000001244872,0.00009951963,0.00007430127,0.000008800637],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001404726,"about_ca_system_score_gemma":0.0001147425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002188222,"about_ca_topic_score_gemma":0.0001048362,"domain_scores_codex":[0.9990761,0.00006395843,0.0002463233,0.0002678364,0.00006789283,0.0002779064],"domain_scores_gemma":[0.9993997,0.000005272523,0.00008342327,0.0003517251,0.00008976078,0.00007015927],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001731781,0.00003143723,0.00620773,0.0001439159,0.000037651,0.000004623908,0.0001556575,0.00000209228,0.9883448,0.00005691346,0.004853726,0.0001440895],"study_design_scores_gemma":[0.0005179247,0.0001051906,0.02865746,0.00003570758,0.000009759175,0.0001199639,0.0002930744,0.000002306831,0.8032456,0.00001444407,0.1668509,0.0001477167],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961865,0.002524095,0.0001261984,0.0000993563,0.000290988,0.00009838984,0.0002667152,0.000008000307,0.0003997386],"genre_scores_gemma":[0.9978523,0.00004569141,0.0003268566,0.00008490354,0.0002497133,0.000001894173,0.0001421006,0.00001557598,0.00128097],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1850993,"threshold_uncertainty_score":0.4245851,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009177946536122514,"score_gpt":0.2648977550415537,"score_spread":0.2557198085054311,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}