{"id":"W3175504699","doi":"10.2196/28049","title":"Emergence of the First Strains of SARS-CoV-2 Lineage B.1.1.7 in Romania: Genomic Analysis","year":2021,"lang":"en","type":"article","venue":"JMIRx Med","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Unitatea Executiva pentru Finantarea Invatamantului Superior, a Cercetarii, Dezvoltarii si Inovarii","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Biology; Lineage (genetic); Infectivity; Genetics; Virology; Virulence; Sequence analysis; Mutation; Amino acid substitution; Pandemic; Coronavirus disease 2019 (COVID-19); Genome; Spike Protein; Gene; Virus; Medicine","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003748182,0.000269133,0.0003310797,0.0009957915,0.0004718456,0.0005705055,0.0002851213,0.0004671387,0.001318997],"category_scores_gemma":[0.001357296,0.0002697041,0.0003864107,0.0007132952,0.0005516112,0.0001803297,0.0004645652,0.0005608198,0.0003508319],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003670429,"about_ca_system_score_gemma":0.0003939866,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003398172,"about_ca_topic_score_gemma":0.002969709,"domain_scores_codex":[0.9995787,0.00007523084,0.00004309638,0.0001138925,0.00008177016,0.000107349],"domain_scores_gemma":[0.9994763,0.00008477817,0.0001978951,0.00006181363,0.0001140097,0.00006527924],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003847202,0.00008455253,0.9381669,0.0001267469,0.00005246413,0.00761457,0.001374653,0.0003020006,0.03328449,0.0002134817,0.0006178493,0.01777767],"study_design_scores_gemma":[0.00002349526,0.000187708,0.9799783,0.00006042798,0.00003282356,0.01156038,0.0009694624,0.0003273988,0.004052499,0.00006153237,0.002735381,0.00001067508],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982727,0.0003035434,0.0002153063,0.00007704185,0.00001065068,0.00002258079,0.0003099397,0.000005919452,0.0007823748],"genre_scores_gemma":[0.9984921,0.0002082727,0.0004828233,0.00009186826,0.000009136112,0.00001243992,0.0005630217,0.000007083457,0.0001331751],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003398172,"threshold_uncertainty_score":0.006756783,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05512750938735006,"score_gpt":0.363175503139691,"score_spread":0.308047993752341,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}