{"id":"W3175781241","doi":"10.1186/s12866-021-02265-4","title":"A new, reliable, and high-throughput strategy to screen bacteria for antagonistic activity against Staphylococcus aureus","year":2021,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Université de Montréal; Dairy Farmers of Canada; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Staphylococcus aureus; Microbiology; Bacteria; Biology; Plasmid; Antibiotics; Recombinant DNA; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001190227,0.0001928422,0.0002914646,0.00001272696,0.0001821364,0.00008327333,0.0001729482,0.0002027765,0.000146436],"category_scores_gemma":[0.00003940695,0.00009108818,0.0000720749,0.0001815851,0.00005269826,0.00004955638,0.0001813927,0.0001010881,0.00001960054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002880641,"about_ca_system_score_gemma":0.00006710434,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002608814,"about_ca_topic_score_gemma":0.001918654,"domain_scores_codex":[0.998753,0.00005706917,0.0001913263,0.0005365207,0.0000284797,0.0004335975],"domain_scores_gemma":[0.999464,0.0001213613,0.00007076934,0.0001001543,0.00008224123,0.0001614096],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001337811,0.00005794304,0.0006463159,0.00001222191,0.00002320945,0.000003987857,0.00001096737,0.000009449222,0.9809728,0.0005429176,0.002904992,0.01468143],"study_design_scores_gemma":[0.00221131,0.004371271,0.1732666,0.00008633226,0.0000960019,0.00006012275,0.0002179365,0.0001214691,0.5628083,0.002239613,0.2531793,0.001341791],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963065,0.0001855914,0.0009196462,0.0007603287,0.0002403525,0.0004110155,0.0009752024,0.00004381017,0.0001575877],"genre_scores_gemma":[0.9911403,0.00006021881,0.006538667,0.0006349173,0.0002856321,0.00001553494,0.0006500504,0.00000262036,0.0006720456],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4181645,"threshold_uncertainty_score":0.3714468,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02220488795218587,"score_gpt":0.2370944342360167,"score_spread":0.2148895462838309,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}