{"id":"W3176214023","doi":"10.1128/mbio.02878-21","title":"Candida albicans Isolates 529L and CHN1 Exhibit Stable Colonization of the Murine Gastrointestinal Tract","year":2021,"lang":"en","type":"article","venue":"mBio","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Center for Complementary and Integrative Health; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; Memorial Sloan-Kettering Cancer Center; Burroughs Wellcome Fund; National Cancer Institute; Ludwig Center at Harvard; National Institutes of Health; National Science Foundation","keywords":"Candida albicans; Corpus albicans; Gastrointestinal tract; Filamentation; Colonization; Phenotype; Host (biology)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002809863,0.0004706108,0.0002608516,0.000710558,0.0002680143,0.0004843488,0.0002882729,0.0005417634,0.001048503],"category_scores_gemma":[0.0002616367,0.0002181647,0.0002684027,0.0002718087,0.0004062814,0.0002157547,0.0003680834,0.001122412,0.0004791227],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004550818,"about_ca_system_score_gemma":0.0003853123,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001488359,"about_ca_topic_score_gemma":0.002330999,"domain_scores_codex":[0.9994065,0.00008609703,0.00004915711,0.0001199038,0.0001891724,0.0001491968],"domain_scores_gemma":[0.9995881,0.00004631271,0.0001211312,0.00006542329,0.0000407302,0.0001382649],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001554648,0.00008870155,0.0003229115,0.000009151414,0.000002946458,0.0000379486,0.00001707065,0.00004022757,0.9985386,0.00004916129,0.00003832156,0.0006994295],"study_design_scores_gemma":[0.00003015487,0.001052314,0.02021014,0.000016794,0.00001268929,0.0004733913,0.00009562722,0.0008150245,0.9759854,0.00006778237,0.001226937,0.00001381077],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955578,0.0006177789,0.001567566,0.0001079405,0.00002001831,0.00003640822,0.0007631819,0.00008815282,0.001241125],"genre_scores_gemma":[0.9910964,0.0004709076,0.003265696,0.0001413465,0.000008262029,0.000096503,0.001288862,0.00006574478,0.003566307],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001488359,"threshold_uncertainty_score":0.003507614,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005804959821085727,"score_gpt":0.219460974502981,"score_spread":0.2136560146818953,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}