{"id":"W3176214023","doi":"10.1128/mbio.02878-21","title":"Candida albicans Isolates 529L and CHN1 Exhibit Stable Colonization of the Murine Gastrointestinal Tract","year":2021,"lang":"en","type":"article","venue":"mBio","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Center for Complementary and Integrative Health; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; Memorial Sloan-Kettering Cancer Center; Burroughs Wellcome Fund; National Cancer Institute; Ludwig Center at Harvard; National Institutes of Health; National Science Foundation","keywords":"Candida albicans; Corpus albicans; Gastrointestinal tract; Filamentation; Colonization; Phenotype; Host (biology)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005371698,0.00006324505,0.00007844957,0.000008413565,0.00007703539,0.00001402115,0.00005444042,0.00003792064,0.00006096136],"category_scores_gemma":[0.0000395324,0.00005055943,0.00002713099,0.00006513588,0.00006043708,0.00000166099,0.00006261712,0.00005242293,0.000001080658],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007980413,"about_ca_system_score_gemma":0.0001627578,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001933037,"about_ca_topic_score_gemma":0.000548859,"domain_scores_codex":[0.9995535,0.00002776588,0.0001089287,0.0001467893,0.00003289396,0.0001300978],"domain_scores_gemma":[0.9996799,0.000005742918,0.00005271791,0.0001548063,0.00007155864,0.0000352874],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000124666,0.00004626524,0.08009965,0.00003024975,0.000004473552,0.000001489105,0.00003839004,0.000005623569,0.9187915,0.00003104576,0.0008330992,0.0001058008],"study_design_scores_gemma":[0.0004938638,0.0002275628,0.268047,0.0000550146,0.00001805087,0.0002617416,0.00009639193,0.00004640525,0.7123437,0.00002728695,0.01828334,0.00009963789],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982442,0.0005483363,0.0001778869,0.0005155961,0.00004038936,0.00007391037,0.00003185932,0.000003194979,0.0003646187],"genre_scores_gemma":[0.9977649,0.00005901825,0.0004535288,0.0001893613,0.00004064414,0.000001853386,0.00005814805,0.000007418733,0.001425111],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2064478,"threshold_uncertainty_score":0.2061754,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005804959821085727,"score_gpt":0.219460974502981,"score_spread":0.2136560146818953,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}