{"id":"W3176830376","doi":"10.1128/jb.00096-21","title":"A Novel PilR/PilS Two-Component System Regulates Necrotic Enteritis Pilus Production in Clostridium perfringens","year":2021,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Government of Canada","keywords":"Pilus; Biology; Clostridium perfringens; Mutant; Pilin; Microbiology; Clostridiaceae; Operon; Virulence; Molecular biology; Gene; Biochemistry; Bacteria; Genetics; Toxin","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001409562,0.0003713573,0.0002057142,0.0002036123,0.0002031982,0.0002415308,0.0001265569,0.0001919138,0.0006376001],"category_scores_gemma":[0.0001049995,0.0001029792,0.0001942591,0.0000710431,0.0001908834,0.0001182006,0.0002344099,0.0003366474,0.0002107233],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003780552,"about_ca_system_score_gemma":0.000238887,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007714572,"about_ca_topic_score_gemma":0.000905042,"domain_scores_codex":[0.9998623,0.000021396,0.000007389721,0.00002863132,0.0000298053,0.00005047762],"domain_scores_gemma":[0.999911,0.00001145742,0.0000231466,0.000007990277,0.00001396265,0.00003255259],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004700524,0.00001267023,0.0001439411,0.00001274901,9.589965e-7,0.00004655253,0.000009550131,0.00001595382,0.9993332,0.00003939232,0.00002321329,0.0003147867],"study_design_scores_gemma":[0.00006165997,0.0006425169,0.08405754,0.00002274786,0.00003604303,0.0007145609,0.0002555786,0.008519117,0.9024903,0.0001775728,0.002996502,0.00002594599],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948934,0.0008631776,0.002828012,0.0001396297,0.00003076189,0.00002382794,0.0001997804,0.0001082988,0.0009131661],"genre_scores_gemma":[0.9968651,0.0002083759,0.00123937,0.0000813145,0.000007794665,0.00001759299,0.0004134415,0.00001178004,0.001155152],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007714572,"threshold_uncertainty_score":0.002743006,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02672083952266448,"score_gpt":0.2869491244744232,"score_spread":0.2602282849517588,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}