{"id":"W3177326348","doi":"10.20517/jtgg.2021.08","title":"Genome-wide homozygosity and risk of four non-Hodgkin lymphoma subtypes","year":2021,"lang":"en","type":"article","venue":"Journal of Translational Genetics and Genomics","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"Division of Cancer Epidemiology and Genetics, National Cancer Institute; Kræftens Bekæmpelse; National Human Genome Research Institute; Deutsche Krebshilfe; National Center for Chronic Disease Prevention and Health Promotion; National Heart, Lung, and Blood Institute; National Institute on Aging; BC Cancer Agency; World Cancer Research Fund; National Center for Advancing Translational Sciences; Medical Research Council; Institut National Du Cancer; Centers for Disease Control and Prevention; National Institutes of Health; National Institute of Environmental Health Sciences; Hellenic Health Foundation; Cancer Research UK; Blood Cancer UK; Institut Gustave-Roussy; Associazione Italiana per la Ricerca sul Cancro; Agence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail; NordForsk; Vetenskapsrådet; Canadian Institutes of Health Research; MedStar Health Research Institute; Cancerfonden; Michael Smith Health Research BC; Centres de Recerca de Catalunya; Institut National de la Santé et de la Recherche Médicale; U.S. Department of Health and Human Services; Frederick National Laboratory for Cancer Research; Generalitat de Catalunya; Fondation de France; Deutsches Krebsforschungszentrum; Ligue Contre le Cancer; European Regional Development Fund; Bundesministerium für Bildung und Forschung; Ministerio de Economía y Competitividad; University of Pittsburgh; World Health Organization; National Cancer Institute; Ohio State University; Instituto de Salud Carlos III; Wake Forest University; American Cancer Society; Brigham and Women's Hospital; University at Buffalo; European Commission","keywords":"Lymphoma; Genome; Runs of Homozygosity; Genetics; Biology; Hodgkin lymphoma; Medicine; Genotype; Single-nucleotide polymorphism; Gene; Immunology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003792859,0.0004294857,0.0006998248,0.001489883,0.0003591801,0.0008618975,0.0004948534,0.0006178801,0.001469061],"category_scores_gemma":[0.005393342,0.0002659761,0.002332541,0.001579123,0.0004245749,0.0003128704,0.0005992188,0.0004595529,0.00009306283],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002576303,"about_ca_system_score_gemma":0.0002466236,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003105673,"about_ca_topic_score_gemma":0.004529659,"domain_scores_codex":[0.997542,0.001171688,0.0002950625,0.0006208112,0.0002406325,0.0001298417],"domain_scores_gemma":[0.9950123,0.003007011,0.001249867,0.0003988113,0.0001689966,0.0001629869],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001153614,0.00002334144,0.9759629,0.0002551942,0.01147339,0.0001741578,0.00008496203,0.0007023869,0.002188122,0.00008892209,0.0001084012,0.007784594],"study_design_scores_gemma":[0.0001377768,0.000292773,0.9855713,0.0001043814,0.009799243,0.0008048317,0.0001112358,0.001204106,0.0008384627,0.0004049799,0.0007146173,0.0000162798],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9885776,0.008762033,0.001239373,0.0001535738,0.00001507733,0.00001419615,0.0008183856,0.00002251741,0.0003973229],"genre_scores_gemma":[0.9986202,0.0004865101,0.0004875282,0.00002801026,0.00001090265,0.000009030459,0.0002953907,0.000004321477,0.00005814919],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003792859,"threshold_uncertainty_score":0.02005875,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01634754712487878,"score_gpt":0.2604938279321859,"score_spread":0.2441462808073071,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}