{"id":"W3178645681","doi":"10.12688/f1000research.53338.1","title":"Semen biomarker TEX101 predicts sperm retrieval success for men with testicular failure","year":2021,"lang":"en","type":"preprint","venue":"F1000Research","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University Health Network; University of Alberta; Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; Physicians' Services Incorporated Foundation","keywords":"Azoospermia; Sperm; Semen; Andrology; Sperm Retrieval; Male infertility; Medicine; Obstructive azoospermia; Infertility; Biology; Genetics; Pregnancy","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001119881,0.0004956095,0.00077722,0.0004250519,0.0001994259,0.0002981474,0.0004042276,0.0006460629,0.001257699],"category_scores_gemma":[0.002203519,0.0003858607,0.0002779702,0.0006930922,0.0002749683,0.0001151805,0.00075196,0.001254481,0.00004873699],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003737845,"about_ca_system_score_gemma":0.001800948,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001981211,"about_ca_topic_score_gemma":0.00005268072,"domain_scores_codex":[0.9953887,0.0001708838,0.0004557594,0.001230646,0.001875147,0.0008787874],"domain_scores_gemma":[0.995758,0.0004728169,0.0001373533,0.001326794,0.001753497,0.0005515404],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0146354,0.003112884,0.6063636,0.01845255,0.00730971,0.008279865,0.001274024,0.0005314361,0.09223333,0.0003485423,0.2373152,0.01014345],"study_design_scores_gemma":[0.01994318,0.004873896,0.8024288,0.007994028,0.003719889,0.001808536,0.001617489,0.05422781,0.05207753,0.0007595535,0.04813138,0.002417912],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9534618,0.00252245,0.009528591,0.007935964,0.0006449445,0.009359424,0.0003581176,0.0005828507,0.01560583],"genre_scores_gemma":[0.9757643,0.000183689,0.008097884,0.0001815594,0.001369841,0.0005694038,0.004185203,0.0002590134,0.009389145],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1960652,"threshold_uncertainty_score":0.9998593,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04463765989142133,"score_gpt":0.3313329065709424,"score_spread":0.2866952466795211,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}