{"id":"W3180961869","doi":"10.1038/s41588-021-00895-y","title":"Haplotype-resolved genome assembly provides insights into evolutionary history of the tea plant Camellia sinensis","year":2021,"lang":"en","type":"article","venue":"Nature Genetics","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":377,"is_retracted":false,"has_abstract":true,"ca_institutions":"Brock University","funders":"National Natural Science Foundation of China","keywords":"Biology; Camellia sinensis; Domestication; Genetic diversity; Genome; Selective sweep; Haplotype; Genetics; Population; Allele; Gene; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004740718,0.0003428269,0.0004156104,0.001408042,0.0005138365,0.0007230035,0.0002758329,0.0003794381,0.001975846],"category_scores_gemma":[0.0008786057,0.0002371021,0.0007123398,0.001137441,0.0001554212,0.0004643438,0.0005939677,0.000662862,0.0009413949],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003177035,"about_ca_system_score_gemma":0.0003943121,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001660334,"about_ca_topic_score_gemma":0.005021448,"domain_scores_codex":[0.9998412,0.00002293281,0.00001486824,0.00007529482,0.00002614397,0.00001948996],"domain_scores_gemma":[0.9996184,0.00009576578,0.00007928654,0.00008090724,0.00006623286,0.00005936577],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007043732,0.0001090208,0.06040334,0.0006875895,0.0004120855,0.001277814,0.001255415,0.004069715,0.8833326,0.002260465,0.001945957,0.04354168],"study_design_scores_gemma":[0.0001640305,0.000509861,0.7640857,0.0002840655,0.0009848654,0.002447418,0.001099236,0.03606518,0.0835191,0.007759213,0.1029186,0.0001628949],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9096426,0.001880022,0.04922926,0.0003639401,0.00009620107,0.00007871931,0.03151815,0.00135127,0.005839861],"genre_scores_gemma":[0.8829397,0.0009228684,0.04919851,0.0001433218,0.00004931472,0.00006511667,0.06454098,0.0005964479,0.001543666],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001975846,"threshold_uncertainty_score":0.006609797,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01173601556930429,"score_gpt":0.248760107092992,"score_spread":0.2370240915236878,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}