{"id":"W3181197111","doi":"10.1002/gepi.22422","title":"The X factor: A robust and powerful approach to X‐chromosome‐inclusive whole‐genome association studies","year":2021,"lang":"en","type":"article","venue":"Genetic Epidemiology","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; Public Health Ontario; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Cystic Fibrosis Canada","keywords":"Robustness (evolution); Autosome; Genetic association; Association (psychology); Allele; Genome-wide association study; Genome; Computer science; X chromosome; Computational biology; Genetics; Biology; Single-nucleotide polymorphism; Gene; Psychology; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007092591,0.0002157769,0.0004032547,0.00002400636,0.0003075891,0.00002768875,0.0002203869,0.0002441284,0.00001853801],"category_scores_gemma":[0.004575924,0.0001608166,0.0001174408,0.00009846212,0.0001925487,0.000003114535,0.0004604546,0.0001426743,0.0000413175],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005133584,"about_ca_system_score_gemma":0.00009703689,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005084835,"about_ca_topic_score_gemma":0.00004938475,"domain_scores_codex":[0.9976741,0.0005316355,0.0005506005,0.0005810344,0.0001319116,0.0005307041],"domain_scores_gemma":[0.9981699,0.0007383553,0.0002001982,0.0003801802,0.0003173251,0.0001940127],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006880644,0.001621523,0.221153,0.0007075495,0.006554126,0.0001271427,0.008320201,0.01071777,0.4850233,0.0149069,0.1253072,0.1248733],"study_design_scores_gemma":[0.001380235,0.001281074,0.194727,0.00003213781,0.0001369292,0.0002417459,0.00736896,0.0002315121,0.008838648,0.007280846,0.7775121,0.0009687961],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9459684,0.03158242,0.002978502,0.01448198,0.0005311071,0.0003487981,0.00007841815,0.00002553891,0.004004779],"genre_scores_gemma":[0.9513452,0.009974697,0.01072597,0.009788623,0.0008065553,0.00008791813,0.0001376045,0.00003504055,0.01709836],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6522049,"threshold_uncertainty_score":0.655791,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03745248222478774,"score_gpt":0.3171714281454809,"score_spread":0.2797189459206931,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}