{"id":"W3181270782","doi":"10.1128/mra.00403-21","title":"Complete Genome Sequences of Priestia megaterium Type and Clinical Strains Feature Complex Plasmid Arrays","year":2021,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada","funders":"Health Canada; Government of Canada","keywords":"Plasmid; Genome; Bacillus megaterium; Biology; Genetics; Gene; Computational biology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001767544,0.0001888208,0.0003277338,0.00002195979,0.0001138245,0.00001484625,0.0001835326,0.0002000014,0.00002907262],"category_scores_gemma":[0.00004771995,0.0001752679,0.00006901618,0.00008326214,0.0005197586,7.926259e-7,0.000314708,0.0001074099,0.000005430523],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000791329,"about_ca_system_score_gemma":0.00009630486,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004271242,"about_ca_topic_score_gemma":0.00002717832,"domain_scores_codex":[0.9987598,0.0001384426,0.0003183588,0.0004637324,0.00004440012,0.000275263],"domain_scores_gemma":[0.999265,0.00001814572,0.0001471623,0.0002904653,0.000217081,0.00006216727],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007023309,0.00005679906,0.02106145,0.00002113192,0.0002602117,0.00000650432,0.00008960602,0.00002086966,0.9761731,0.00001190303,0.002147159,0.00008105185],"study_design_scores_gemma":[0.0008388026,0.0007569515,0.0285831,0.00001427093,0.00006183811,0.0001126902,0.0003698233,0.000006289049,0.0242092,0.00001933085,0.9447552,0.0002725132],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939464,0.002716024,0.00005274698,0.0003358409,0.0001492388,0.0001298924,0.002186309,0.000003507901,0.0004800409],"genre_scores_gemma":[0.9885184,0.0009683667,0.002877285,0.001122527,0.0001944652,0.000005113449,0.005675221,0.0000210486,0.0006175805],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9519639,"threshold_uncertainty_score":0.7147219,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03406517359577156,"score_gpt":0.2789549873476146,"score_spread":0.244889813751843,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}